extract_genomic_dna: extract_genomic_dna

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-:fe88f4eeaddc
+:1a10864abc1f
 return seq_path
 except Exception, e:
 stop_err('Error running faToTwoBit. ' + str(e))
+def get_description_field_delimiter(description_field_delimiter):
+# Convert a word to an appropriate character.
+if description_field_delimiter == 'underscore':
+return '_'
+if description_field_delimiter == 'semicolon':
+return ';'
+if description_field_delimiter == 'comma':
+return ','
+if description_field_delimiter == 'tilda':
+return '~'
+if description_field_delimiter == 'vetical_bar':
+return '|'
+# Set the default to underscore.
+return '_'
 def get_lines(feature):
 # Get feature's line(s).
 if isinstance(feature, GFFFeature):
 return feature.lines()
 else:

Mercurial > repos > greg > extract_genomic_dna