Mercurial > repos > greg > diffusion_signal_reconstruction

diff diffusion_signal_reconstruction.py @ 10:7bcc39c8ccfd draft

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author greg
date Thu, 30 Nov 2017 08:51:01 -0500
parents dc700deb06c1
children bca3ded6d5cc
line wrap: on
line diff
--- a/diffusion_signal_reconstruction.py	Thu Nov 30 08:30:06 2017 -0500
+++ b/diffusion_signal_reconstruction.py	Thu Nov 30 08:51:01 2017 -0500
@@ -54,10 +54,8 @@
 # TODO: do not hard-code 'stanford_hardi'
 input_dir = 'stanford_hardi'
 os.mkdir(input_dir)
-input_dir = args.drmi_dataset
 for f in os.list_dir(args.input_extra_files_path):
-    shutil.copy(f, input_dir)
-fetch_stanford_hardi()
+    shutil.copy(os.path.join(args.input_extra_files_path, f), input_dir)
 img, gtab = read_stanford_hardi()
 
 data = img.get_data()