Mercurial > repos > greg > data_manager_pima_pv_downloader

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author greg
date Tue, 18 Oct 2022 20:37:28 +0000
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1 name: data_manager_pima_pv_downloader
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2 owner: iuc
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3 description: Data manager to download the PIMA plasmids_and_vectors.fasta files for use by the PIMA pipeline tools.
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4 homepage_url: https://github.com/appliedbinf/pima_md
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5 long_description: |
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6 PIMA (Plasmid, Integrations, Mutations, and Antibiotic) resistance annotation pipeline is a high-throughput
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7 sequence analysis pipeline. PIMA is an end-to-end solution encompassing all the steps required to transform
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8 raw ONT output into high-quality annotated assemblies. PIMA supports providing optional Illumina paired end
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9 reads for polishing and error correcting assemblies.
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10 remote_repository_url: "https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_pima_pv_downloader"
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11 type: unrestricted
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12 categories:
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13 - Data Managers