view data_manager_conf.xml @ 0:d69ebf52c233 draft

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author greg
date Tue, 12 Oct 2021 14:15:35 +0000
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children 787f1ca9045a
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<data_managers>
    <data_manager tool_file="data_manager/malt_index_builder.xml" id="malt_index_builder" version="0.5.3">
        <data_table name="malt_indices">
            <output>
                <column name="value" />
                <column name="dbkey" />
                <column name="name" />
                <column name="path" output_ref="out_file" >
                    <move type="directory" relativize_symlinks="True">
                        <!-- <source>${path}</source>--> <!-- out_file.extra_files_path is used as base by default --> <!-- if no source, eg for type=directory, then refers to base -->
                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/malt_index/${value}</target>
                    </move>
                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/malt_index/${value}/${path}</value_translation>
                    <value_translation type="function">abspath</value_translation>
                </column>
            </output>
        </data_table>
    </data_manager>
</data_managers>