Mercurial > repos > greg > data_manager_malt_index_builder

comparison data_manager_conf.xml @ 0:d69ebf52c233 draft

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author greg
date Tue, 12 Oct 2021 14:15:35 +0000
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children 787f1ca9045a
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1 <data_managers>
2 <data_manager tool_file="data_manager/malt_index_builder.xml" id="malt_index_builder" version="0.5.3">
3 <data_table name="malt_indices">
4 <output>
5 <column name="value" />
6 <column name="dbkey" />
7 <column name="name" />
8 <column name="path" output_ref="out_file" >
9 <move type="directory" relativize_symlinks="True">
10 <!-- <source>${path}</source>--> <!-- out_file.extra_files_path is used as base by default --> <!-- if no source, eg for type=directory, then refers to base -->
11 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/malt_index/${value}</target>
12 </move>
13 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/malt_index/${value}/${path}</value_translation>
14 <value_translation type="function">abspath</value_translation>
15 </column>
16 </output>
17 </data_table>
18 </data_manager>
19 </data_managers>