diff data_manager_conf.xml @ 1:787f1ca9045a draft default tip

Uploaded
author greg
date Wed, 13 Oct 2021 20:12:48 +0000
parents d69ebf52c233
children
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--- a/data_manager_conf.xml	Tue Oct 12 14:15:35 2021 +0000
+++ b/data_manager_conf.xml	Wed Oct 13 20:12:48 2021 +0000
@@ -1,16 +1,15 @@
 <data_managers>
-    <data_manager tool_file="data_manager/malt_index_builder.xml" id="malt_index_builder" version="0.5.3">
+    <data_manager tool_file="data_manager/malt_index_builder.xml" id="data_manager_malt_index_builder">
         <data_table name="malt_indices">
             <output>
-                <column name="value" />
-                <column name="dbkey" />
-                <column name="name" />
-                <column name="path" output_ref="out_file" >
+                <column name="value"/>
+                <column name="dbkey"/>
+                <column name="name"/>
+                <column name="path" output_ref="out_file">
                     <move type="directory" relativize_symlinks="True">
-                        <!-- <source>${path}</source>--> <!-- out_file.extra_files_path is used as base by default --> <!-- if no source, eg for type=directory, then refers to base -->
-                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/malt_index/${value}</target>
+                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">malt_index/${value}</target>
                     </move>
-                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/malt_index/${value}/${path}</value_translation>
+                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/malt_index/${value}</value_translation>
                     <value_translation type="function">abspath</value_translation>
                 </column>
             </output>