Mercurial > repos > greg > bwa_059
comparison tool_dependencies.xml @ 0:a347750db1d1 draft default tip
Uploaded tool_dependencies.xml
| author | greg |
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| date | Wed, 30 Jan 2013 16:35:56 -0500 |
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| -1:000000000000 | 0:a347750db1d1 |
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| 1 <?xml version="1.0"?> | |
| 2 <tool_dependency> | |
| 3 <package name="bwa" version="0.5.9"> | |
| 4 <install version="1.0"> | |
| 5 <actions> | |
| 6 <action type="download_by_url">http://downloads.sourceforge.net/project/bio-bwa/bwa-0.5.9.tar.bz2</action> | |
| 7 <action type="shell_command">make clean</action> | |
| 8 <action type="shell_command">make</action> | |
| 9 <action type="move_file"> | |
| 10 <source>bwa</source> | |
| 11 <destination>$INSTALL_DIR/bin</destination> | |
| 12 </action> | |
| 13 <action type="set_environment"> | |
| 14 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> | |
| 15 </action> | |
| 16 </actions> | |
| 17 </install> | |
| 18 <readme> | |
| 19 Compiling BWA requires zlib and libpthread to be present on your system. | |
| 20 </readme> | |
| 21 </package> | |
| 22 </tool_dependency> |