Mercurial > repos > galaxyp > package_openms_1_11

annotate tool_dependencies.xml @ 0:6b370f3d9376 draft

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author bgruening
date Tue, 12 Nov 2013 08:52:06 -0500
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="libtool" version="2.4">
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4 <repository changeset_revision="5ccfb33b5622" name="package_libtool_2_4" owner="iuc" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" />
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5 </package>
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6 <package name="Qt" version="4.8">
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7 <repository changeset_revision="64344b23c64c" name="package_qt_4_8" owner="iuc" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" />
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8 </package>
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9 <package name="OpenMS" version="1.10.0">
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10 <install version="1.0">
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11 <actions>
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12 <action type="download_by_url">http://downloads.sourceforge.net/project/open-ms/OpenMS/OpenMS-1.11/OpenMS-1.11.0.tar.gz</action>
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13
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14 <!-- populate the environment variables from the dependend repos -->
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15 <action type="set_environment_for_install">
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16 <repository changeset_revision="5ccfb33b5622" name="package_libtool_2_4" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu">
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17 <package name="libtool" version="2.4" />
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18 </repository>
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19 <repository changeset_revision="64344b23c64c" name="package_qt_4_8" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu">
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20 <package name="Qt" version="4.8 " />
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21 </repository>
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22 </action>
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23
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24 <action type="change_directory">contrib</action>
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25 <action type="shell_command">cmake .</action>
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26 <action type="change_directory">..</action>
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27 <action type="shell_command">cmake . -DINSTALL_PREFIX=$INSTALL_DIR</action>
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28 <action type="shell_command">make doc_minimal</action>
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29 <action type="shell_command">make install</action>
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30 <action type="set_environment">
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31 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
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32 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$INSTALL_DIR/lib</environment_variable>
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33 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[QT_ROOT_DIR]/lib/</environment_variable>
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34 </action>
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35 </actions>
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36 </install>
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37 <readme>
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38 This package downloads and installs OpenMS.
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39 http://open-ms.sourceforge.net/
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40 </readme>
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41 </package>
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42 </tool_dependency>