diff NoiseFilterSGolay.xml @ 12:cd0e5d7a8231 draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
author galaxyp
date Wed, 15 May 2019 05:56:37 -0400
parents 3c6cd53e0438
children 7cd79c369f8d
line wrap: on
line diff
--- a/NoiseFilterSGolay.xml	Mon Feb 12 08:50:48 2018 -0500
+++ b/NoiseFilterSGolay.xml	Wed May 15 05:56:37 2019 -0400
@@ -1,7 +1,7 @@
 <?xml version='1.0' encoding='UTF-8'?>
-<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.-->
+<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTDConverter.-->
 <!--Proposed Tool Section: [Signal processing and preprocessing]-->
-<tool id="NoiseFilterSGolay" name="NoiseFilterSGolay" version="2.2.0">
+<tool id="NoiseFilterSGolay" name="NoiseFilterSGolay" version="2.3.0">
   <description>Removes noise from profile spectra by using a Savitzky Golay filter. Requires uniform (equidistant) data.</description>
   <macros>
     <token name="@EXECUTABLE@">NoiseFilterSGolay</token>
@@ -10,7 +10,7 @@
   <expand macro="references"/>
   <expand macro="stdio"/>
   <expand macro="requirements"/>
-  <command>NoiseFilterSGolay
+  <command detect_errors="aggressive"><![CDATA[NoiseFilterSGolay
 
 #if $param_in:
   -in $param_in
@@ -37,7 +37,7 @@
   -force
 #end if
 #end if
-</command>
+]]></command>
   <inputs>
     <param name="param_in" type="data" format="mzml" optional="False" label="input raw data file" help="(-in) "/>
     <param name="param_algorithm_frame_length" type="integer" value="11" label="The number of subsequent data points used for smoothing" help="(-frame_length) &lt;br&gt;This number has to be uneven. If it is not, 1 will be added"/>
@@ -56,5 +56,5 @@
   <help>Removes noise from profile spectra by using a Savitzky Golay filter. Requires uniform (equidistant) data.
 
 
-For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/TOPP_NoiseFilterSGolay.html</help>
+For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/TOPP_NoiseFilterSGolay.html</help>
 </tool>