Mercurial > repos > galaxyp > openms_multiplexresolver
diff MultiplexResolver.xml @ 12:302363c6254a draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
| author | galaxyp |
|---|---|
| date | Wed, 15 May 2019 06:02:16 -0400 |
| parents | 2ba399876379 |
| children | 9d5c51404764 |
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--- a/MultiplexResolver.xml Mon Feb 12 08:53:24 2018 -0500 +++ b/MultiplexResolver.xml Wed May 15 06:02:16 2019 -0400 @@ -1,7 +1,7 @@ <?xml version='1.0' encoding='UTF-8'?> -<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.--> +<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTDConverter.--> <!--Proposed Tool Section: [Utilities]--> -<tool id="MultiplexResolver" name="MultiplexResolver" version="2.2.0"> +<tool id="MultiplexResolver" name="MultiplexResolver" version="2.3.0"> <description>Completes peptide multiplets and resolves conflicts within them.</description> <macros> <token name="@EXECUTABLE@">MultiplexResolver</token> @@ -10,7 +10,7 @@ <expand macro="references"/> <expand macro="stdio"/> <expand macro="requirements"/> - <command>MultiplexResolver + <command detect_errors="aggressive"><![CDATA[MultiplexResolver #if $param_in: -in $param_in @@ -77,7 +77,7 @@ -labels:ICPL10 $adv_opts.param_labels_ICPL10 #end if #end if -</command> +]]></command> <inputs> <param name="param_in" type="data" format="consensusxml" optional="False" label="Peptide multiplets with assigned sequence information" help="(-in) "/> <param name="param_algorithm_labels" type="text" size="30" value="[][Lys8,Arg10]" label="Labels used for labelling the samples" help="(-labels) [...] specifies the labels for a single sample. For example <br> <br>[][Lys8,Arg10] ... SILAC <br>[][Lys4,Arg6][Lys8,Arg10] ... triple-SILAC <br>[Dimethyl0][Dimethyl6] ... Dimethyl <br>[Dimethyl0][Dimethyl4][Dimethyl8] ... triple Dimethyl <br>[ICPL0][ICPL4][ICPL6][ICPL10] ... ICPL"> @@ -115,5 +115,5 @@ <help>Completes peptide multiplets and resolves conflicts within them. -For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_MultiplexResolver.html</help> +For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/UTILS_MultiplexResolver.html</help> </tool>