Mercurial > repos > galaxyp > openms_metaprosip
diff MetaProSIP.xml @ 1:5fc08238d0ce draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 820d990f9217706e693b8a2f1da91e13c09cb0fb
| author | galaxyp |
|---|---|
| date | Tue, 18 Apr 2017 15:43:02 -0400 |
| parents | 0283517872f8 |
| children | 7c65b5fce28e |
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--- a/MetaProSIP.xml Wed Mar 01 10:09:33 2017 -0500 +++ b/MetaProSIP.xml Tue Apr 18 15:43:02 2017 -0400 @@ -52,13 +52,23 @@ -weight_merge_window $param_weight_merge_window #end if #if $param_plot_extension: - -plot_extension $param_plot_extension + -plot_extension + #if " " in str($param_plot_extension): + "$param_plot_extension" + #else + $param_plot_extension + #end if #end if #if $param_qc_output_directory: -qc_output_directory "$param_qc_output_directory" #end if #if $param_labeling_element: - -labeling_element $param_labeling_element + -labeling_element + #if " " in str($param_labeling_element): + "$param_labeling_element" + #else + $param_labeling_element + #end if #end if #if $param_use_unassigned_ids: -use_unassigned_ids @@ -104,7 +114,12 @@ -score_plot_yaxis_min $adv_opts.param_score_plot_yaxis_min #end if #if $adv_opts.param_collect_method: - -collect_method $adv_opts.param_collect_method + -collect_method + #if " " in str($adv_opts.param_collect_method): + "$adv_opts.param_collect_method" + #else + $adv_opts.param_collect_method + #end if #end if #if $adv_opts.param_lowRIA_correlation_threshold: -lowRIA_correlation_threshold $adv_opts.param_lowRIA_correlation_threshold