diff generate.sh @ 18:6daaa75ccb99 draft

"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 6e7368b7f178fbd1f08c28eea1b538add6943a65-dirty"
author galaxyp
date Sun, 13 Dec 2020 15:03:50 +0000
parents 6f6c1cb968a0
children 2ad1b4ec3e5e
line wrap: on
line diff
--- a/generate.sh	Sat Dec 05 19:49:57 2020 +0000
+++ b/generate.sh	Sun Dec 13 15:03:50 2020 +0000
@@ -6,6 +6,7 @@
 ## FILETYPES_RE=$(grep -v "^#" $FILETYPES | grep -v "^$" | cut -f 1 -d" " | tr '\n' '|' | sed 's/|$//'| sed 's/|/\\|/g')
 
 export tmp=$(mktemp -d)
+export tmp="/tmp/openms-stuff"
 
 export CTDCONVERTER="$tmp/CTDConverter"
 ###############################################################################
@@ -23,7 +24,7 @@
 ## - the git clone of OpenMS (for generating the tests)
 ## - ctd files
 ###############################################################################
-bash ./test-data.sh ./macros_autotest.xml
+# bash ./test-data.sh ./macros_autotest.xml
 
 ###############################################################################
 ## get the