diff BaselineFilter.xml @ 12:69b38f433cf6 draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
author galaxyp
date Wed, 15 May 2019 05:18:37 -0400
parents a97a8c15badb
children 5892521f74c1
line wrap: on
line diff
--- a/BaselineFilter.xml	Mon Feb 12 08:39:32 2018 -0500
+++ b/BaselineFilter.xml	Wed May 15 05:18:37 2019 -0400
@@ -1,7 +1,7 @@
 <?xml version='1.0' encoding='UTF-8'?>
-<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.-->
+<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTDConverter.-->
 <!--Proposed Tool Section: [Signal processing and preprocessing]-->
-<tool id="BaselineFilter" name="BaselineFilter" version="2.2.0">
+<tool id="BaselineFilter" name="BaselineFilter" version="2.3.0">
   <description>Removes the baseline from profile spectra using a top-hat filter.</description>
   <macros>
     <token name="@EXECUTABLE@">BaselineFilter</token>
@@ -10,7 +10,7 @@
   <expand macro="references"/>
   <expand macro="stdio"/>
   <expand macro="requirements"/>
-  <command>BaselineFilter
+  <command detect_errors="aggressive"><![CDATA[BaselineFilter
 
 #if $param_in:
   -in $param_in
@@ -42,7 +42,7 @@
   -force
 #end if
 #end if
-</command>
+]]></command>
   <inputs>
     <param name="param_in" type="data" format="mzml" optional="False" label="input raw data file" help="(-in) "/>
     <param name="param_struc_elem_length" type="float" value="3.0" label="Length of the structuring element (should be wider than maximal peak width - see documentation)" help="(-struc_elem_length) "/>
@@ -72,5 +72,5 @@
   <help>Removes the baseline from profile spectra using a top-hat filter.
 
 
-For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/TOPP_BaselineFilter.html</help>
+For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/TOPP_BaselineFilter.html</help>
 </tool>