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view HighResPrecursorMassCorrector.xml @ 4:60a33af52042 draft default tip
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author | galaxyp |
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date | Wed, 13 May 2015 21:19:44 -0400 |
parents | 3070d71e0e5c |
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<?xml version='1.0' encoding='UTF-8'?> <tool id="HighResPrecursorMassCorrector" name="HighResPrecursorMassCorrector" version="2.0.0"> <description>Corrects the precursor mz determined by the instrument software.</description> <macros> <token name="@EXECUTABLE@">HighResPrecursorMassCorrector</token> <import>macros.xml</import> </macros> <expand macro="stdio"/> <expand macro="requirements"/> <command>HighResPrecursorMassCorrector #if $param_in: -in $param_in #end if #if $param_out: -out $param_out #end if #if $param_out_csv: -out_csv $param_out_csv #end if -threads \${GALAXY_SLOTS:-24} #if $adv_opts.adv_opts_selector=='advanced': #if $adv_opts.param_force: -force #end if #end if </command> <inputs> <param name="param_in" type="data" format="mzml" optional="False" label="input file (centroided data)" help="(-in) "/> <expand macro="advanced_options"> <param name="param_force" type="boolean" truevalue="-force" falsevalue="" checked="false" optional="True" label="Overwrite tool specific checks" help="(-force) "/> </expand> </inputs> <outputs> <data name="param_out" format="mzml"/> <data name="param_out_csv" format="tabular"/> </outputs> <help>**What it does** Corrects the precursor mz determined by the instrument software. For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/TOPP_HighResPrecursorMassCorrector.html</help> <expand macro="references"/> </tool>