Mercurial > repos > galaxyp > msgfplus
comparison test-data/201208-378803-msgf.mzid @ 0:dbc77b37e20f draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit e6dd776a0df16d06df3bd2f230ca80c7420d9125-dirty
author | galaxyp |
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date | Fri, 06 Nov 2015 14:31:57 -0500 |
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1 <?xml version="1.0" encoding="UTF-8"?> | |
2 <MzIdentML id="MS-GF+" version="1.1.0" xmlns="http://psidev.info/psi/pi/mzIdentML/1.1" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psidev.info/psi/pi/mzIdentML/1.1 http://www.psidev.info/files/mzIdentML1.1.0.xsd" creationDate="2015-11-06T18:22:31" > | |
3 <cvList xmlns="http://psidev.info/psi/pi/mzIdentML/1.1"> | |
4 <cv id="PSI-MS" uri="http://psidev.cvs.sourceforge.net/viewvc/*checkout*/psidev/psi/psi-ms/mzML/controlledVocabulary/psi-ms.obo" version="3.30.0" fullName="PSI-MS"/> | |
5 <cv id="UNIMOD" uri="http://www.unimod.org/obo/unimod.obo" fullName="UNIMOD"/> | |
6 <cv id="UO" uri="http://obo.cvs.sourceforge.net/*checkout*/obo/obo/ontology/phenotype/unit.obo" fullName="UNIT-ONTOLOGY"/> | |
7 </cvList> | |
8 <AnalysisSoftwareList xmlns="http://psidev.info/psi/pi/mzIdentML/1.1"> | |
9 <AnalysisSoftware version="Beta (v10089)" name="MS-GF+" id="ID_software"> | |
10 <SoftwareName> | |
11 <cvParam accession="MS:1002048" cvRef="PSI-MS" name="MS-GF+"/> | |
12 </SoftwareName> | |
13 </AnalysisSoftware> | |
14 </AnalysisSoftwareList> | |
15 <SequenceCollection xmlns="http://psidev.info/psi/pi/mzIdentML/1.1"> | |
16 <DBSequence accession="XXX_gi|528968104|ref|XP_005212567.1|" searchDatabase_ref="SearchDB_1" length="815" id="DBSeq83632"/> | |
17 <DBSequence accession="XXX_gi|528968106|ref|XP_005212568.1|" searchDatabase_ref="SearchDB_1" length="811" id="DBSeq84448"/> | |
18 <DBSequence accession="XXX_gi|528968108|ref|XP_005212569.1|" searchDatabase_ref="SearchDB_1" length="766" id="DBSeq85260"/> | |
19 <DBSequence accession="XXX_gi|115497338|ref|NP_001069884.1|" searchDatabase_ref="SearchDB_1" length="626" id="DBSeq93486"/> | |
20 <DBSequence accession="gi|30466252|ref|NP_848667.1|" searchDatabase_ref="SearchDB_1" length="260" id="DBSeq46845"> | |
21 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|30466252|ref|NP_848667.1| carbonic anhydrase 2 [Bos taurus]" name="protein description"/> | |
22 </DBSequence> | |
23 <DBSequence accession="gi|30794280|ref|NP_851335.1|" searchDatabase_ref="SearchDB_1" length="607" id="DBSeq43937"> | |
24 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|30794280|ref|NP_851335.1| serum albumin precursor [Bos taurus]" name="protein description"/> | |
25 </DBSequence> | |
26 <DBSequence accession="XXX_gi|528908802|ref|XP_005199340.1|" searchDatabase_ref="SearchDB_1" length="616" id="DBSeq56223"/> | |
27 <DBSequence accession="XXX_gi|528908804|ref|XP_005199341.1|" searchDatabase_ref="SearchDB_1" length="616" id="DBSeq56840"/> | |
28 <DBSequence accession="XXX_gi|528908806|ref|XP_005199342.1|" searchDatabase_ref="SearchDB_1" length="616" id="DBSeq57457"/> | |
29 <DBSequence accession="XXX_gi|528908808|ref|XP_005199343.1|" searchDatabase_ref="SearchDB_1" length="615" id="DBSeq58074"/> | |
30 <DBSequence accession="XXX_gi|528908810|ref|XP_005199344.1|" searchDatabase_ref="SearchDB_1" length="596" id="DBSeq58690"/> | |
31 <DBSequence accession="XXX_gi|528908812|ref|XP_609847.5|" searchDatabase_ref="SearchDB_1" length="588" id="DBSeq59287"/> | |
32 <DBSequence accession="XXX_gi|528959647|ref|XP_005210511.1|" searchDatabase_ref="SearchDB_1" length="616" id="DBSeq79979"/> | |
33 <DBSequence accession="XXX_gi|528959649|ref|XP_005210512.1|" searchDatabase_ref="SearchDB_1" length="616" id="DBSeq80596"/> | |
34 <DBSequence accession="XXX_gi|528959651|ref|XP_005210513.1|" searchDatabase_ref="SearchDB_1" length="616" id="DBSeq81213"/> | |
35 <DBSequence accession="XXX_gi|528959653|ref|XP_005210514.1|" searchDatabase_ref="SearchDB_1" length="615" id="DBSeq81830"/> | |
36 <DBSequence accession="XXX_gi|528959655|ref|XP_005210515.1|" searchDatabase_ref="SearchDB_1" length="596" id="DBSeq82446"/> | |
37 <DBSequence accession="XXX_gi|528959657|ref|XP_002689899.2|" searchDatabase_ref="SearchDB_1" length="588" id="DBSeq83043"/> | |
38 <DBSequence accession="XXX_gi|528928354|ref|XP_005193233.1|" searchDatabase_ref="SearchDB_1" length="588" id="DBSeq64736"/> | |
39 <DBSequence accession="gi|528944676|ref|XP_005204734.1|" searchDatabase_ref="SearchDB_1" length="7610" id="DBSeq9505"> | |
40 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528944676|ref|XP_005204734.1| PREDICTED: microtubule-actin cross-linking factor 1 isoform X1 [Bos taurus]" name="protein description"/> | |
41 </DBSequence> | |
42 <DBSequence accession="gi|528944678|ref|XP_005204735.1|" searchDatabase_ref="SearchDB_1" length="5498" id="DBSeq17116"> | |
43 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528944678|ref|XP_005204735.1| PREDICTED: microtubule-actin cross-linking factor 1 isoform X2 [Bos taurus]" name="protein description"/> | |
44 </DBSequence> | |
45 <DBSequence accession="gi|219804516|ref|NP_001137332.1|" searchDatabase_ref="SearchDB_1" length="5422" id="DBSeq38514"> | |
46 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|219804516|ref|NP_001137332.1| microtubule-actin cross-linking factor 1 [Bos taurus]" name="protein description"/> | |
47 </DBSequence> | |
48 <DBSequence accession="XXX_gi|27806505|ref|NP_776558.1|" searchDatabase_ref="SearchDB_1" length="305" id="DBSeq100520"/> | |
49 <DBSequence accession="XXX_gi|528944676|ref|XP_005204734.1|" searchDatabase_ref="SearchDB_1" length="7610" id="DBSeq65480"/> | |
50 <DBSequence accession="XXX_gi|528944678|ref|XP_005204735.1|" searchDatabase_ref="SearchDB_1" length="5498" id="DBSeq73091"/> | |
51 <DBSequence accession="XXX_gi|219804516|ref|NP_001137332.1|" searchDatabase_ref="SearchDB_1" length="5422" id="DBSeq94489"/> | |
52 <DBSequence accession="gi|528993971|ref|XP_005219929.1|" searchDatabase_ref="SearchDB_1" length="768" id="DBSeq31093"> | |
53 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528993971|ref|XP_005219929.1| PREDICTED: lactoperoxidase isoform X1 [Bos taurus]" name="protein description"/> | |
54 </DBSequence> | |
55 <DBSequence accession="gi|528993973|ref|XP_005219930.1|" searchDatabase_ref="SearchDB_1" length="712" id="DBSeq31862"> | |
56 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528993973|ref|XP_005219930.1| PREDICTED: lactoperoxidase isoform X2 [Bos taurus]" name="protein description"/> | |
57 </DBSequence> | |
58 <DBSequence accession="gi|27806851|ref|NP_776358.1|" searchDatabase_ref="SearchDB_1" length="712" id="DBSeq47665"> | |
59 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|27806851|ref|NP_776358.1| lactoperoxidase precursor [Bos taurus]" name="protein description"/> | |
60 </DBSequence> | |
61 <DBSequence accession="gi|528961840|ref|XP_005211303.1|" searchDatabase_ref="SearchDB_1" length="719" id="DBSeq49855"> | |
62 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528961840|ref|XP_005211303.1| PREDICTED: protein KHNYN isoform X1 [Bos taurus]" name="protein description"/> | |
63 </DBSequence> | |
64 <DBSequence accession="gi|528961845|ref|XP_005211304.1|" searchDatabase_ref="SearchDB_1" length="676" id="DBSeq50575"> | |
65 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528961845|ref|XP_005211304.1| PREDICTED: protein KHNYN isoform X2 [Bos taurus]" name="protein description"/> | |
66 </DBSequence> | |
67 <DBSequence accession="gi|156523214|ref|NP_001096021.1|" searchDatabase_ref="SearchDB_1" length="676" id="DBSeq54922"> | |
68 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|156523214|ref|NP_001096021.1| protein KHNYN [Bos taurus]" name="protein description"/> | |
69 </DBSequence> | |
70 <DBSequence accession="gi|528921178|ref|XP_592304.7|" searchDatabase_ref="SearchDB_1" length="1252" id="DBSeq4600"> | |
71 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528921178|ref|XP_592304.7| PREDICTED: protein flightless-1 homolog isoformX1 [Bos taurus]" name="protein description"/> | |
72 </DBSequence> | |
73 <DBSequence accession="gi|528921180|ref|XP_005195747.1|" searchDatabase_ref="SearchDB_1" length="1197" id="DBSeq5853"> | |
74 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528921180|ref|XP_005195747.1| PREDICTED: protein flightless-1 homolog isoform X2 [Bos taurus]" name="protein description"/> | |
75 </DBSequence> | |
76 <DBSequence accession="gi|528995523|ref|XP_002695913.2|" searchDatabase_ref="SearchDB_1" length="1299" id="DBSeq33873"> | |
77 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528995523|ref|XP_002695913.2| PREDICTED: protein flightless-1 homolog [Bos taurus]" name="protein description"/> | |
78 </DBSequence> | |
79 <DBSequence accession="XXX_gi|358414198|ref|XP_002700672.2|" searchDatabase_ref="SearchDB_1" length="1099" id="DBSeq104353"/> | |
80 <DBSequence accession="XXX_gi|528966552|ref|XP_005211956.1|" searchDatabase_ref="SearchDB_1" length="1131" id="DBSeq107227"/> | |
81 <DBSequence accession="XXX_gi|528966554|ref|XP_005211957.1|" searchDatabase_ref="SearchDB_1" length="1099" id="DBSeq108359"/> | |
82 <DBSequence accession="XXX_gi|297479727|ref|XP_002690982.1|" searchDatabase_ref="SearchDB_1" length="1099" id="DBSeq109459"/> | |
83 <DBSequence accession="XXX_gi|528920173|ref|XP_001788336.2|" searchDatabase_ref="SearchDB_1" length="620" id="DBSeq59954"/> | |
84 <DBSequence accession="XXX_gi|297486082|ref|XP_002695413.1|" searchDatabase_ref="SearchDB_1" length="626" id="DBSeq86441"/> | |
85 <DBSequence accession="gi|358414198|ref|XP_002700672.2|" searchDatabase_ref="SearchDB_1" length="1099" id="DBSeq48378"> | |
86 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|358414198|ref|XP_002700672.2| PREDICTED: LOW QUALITY PROTEIN: solute carrier family 12 member 1 [Bos taurus]" name="protein description"/> | |
87 </DBSequence> | |
88 <DBSequence accession="gi|528966552|ref|XP_005211956.1|" searchDatabase_ref="SearchDB_1" length="1131" id="DBSeq51252"> | |
89 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528966552|ref|XP_005211956.1| PREDICTED: solute carrier family 12 member 1 isoform X2 [Bos taurus]" name="protein description"/> | |
90 </DBSequence> | |
91 <DBSequence accession="gi|528966554|ref|XP_005211957.1|" searchDatabase_ref="SearchDB_1" length="1099" id="DBSeq52384"> | |
92 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528966554|ref|XP_005211957.1| PREDICTED: solute carrier family 12 member 1 isoform X3 [Bos taurus]" name="protein description"/> | |
93 </DBSequence> | |
94 <DBSequence accession="gi|297479727|ref|XP_002690982.1|" searchDatabase_ref="SearchDB_1" length="1099" id="DBSeq53484"> | |
95 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|297479727|ref|XP_002690982.1| PREDICTED: solute carrier family 12 member 1 isoform X1 [Bos taurus]" name="protein description"/> | |
96 </DBSequence> | |
97 <DBSequence accession="XXX_gi|528921178|ref|XP_592304.7|" searchDatabase_ref="SearchDB_1" length="1252" id="DBSeq60575"/> | |
98 <DBSequence accession="XXX_gi|528921180|ref|XP_005195747.1|" searchDatabase_ref="SearchDB_1" length="1197" id="DBSeq61828"/> | |
99 <DBSequence accession="XXX_gi|528995523|ref|XP_002695913.2|" searchDatabase_ref="SearchDB_1" length="1299" id="DBSeq89848"/> | |
100 <DBSequence accession="XXX_gi|32880221|ref|NP_872593.1|" searchDatabase_ref="SearchDB_1" length="558" id="DBSeq103081"/> | |
101 <DBSequence accession="XXX_gi|119924469|ref|XP_001252524.1|" searchDatabase_ref="SearchDB_1" length="376" id="DBSeq105453"/> | |
102 <DBSequence accession="XXX_gi|28849951|ref|NP_788787.1|" searchDatabase_ref="SearchDB_1" length="376" id="DBSeq111574"/> | |
103 <Peptide id="Pep1"> | |
104 <PeptideSequence>ISELFDKLDSMSVDK</PeptideSequence> | |
105 </Peptide> | |
106 <Peptide id="Pep2"> | |
107 <PeptideSequence>EPISVSSQQMLK</PeptideSequence> | |
108 </Peptide> | |
109 <Peptide id="Pep3"> | |
110 <PeptideSequence>TVMENFVAFVDK</PeptideSequence> | |
111 </Peptide> | |
112 <Peptide id="Pep4"> | |
113 <PeptideSequence>GCESCVYPK</PeptideSequence> | |
114 <Modification monoisotopicMassDelta="57.021463735" location="2"> | |
115 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/> | |
116 </Modification> | |
117 <Modification monoisotopicMassDelta="57.021463735" location="5"> | |
118 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/> | |
119 </Modification> | |
120 </Peptide> | |
121 <Peptide id="Pep5"> | |
122 <PeptideSequence>RMMESRQR</PeptideSequence> | |
123 </Peptide> | |
124 <Peptide id="Pep6"> | |
125 <PeptideSequence>VMDFFRRIDK</PeptideSequence> | |
126 </Peptide> | |
127 <Peptide id="Pep7"> | |
128 <PeptideSequence>QINYDFLTR</PeptideSequence> | |
129 </Peptide> | |
130 <Peptide id="Pep8"> | |
131 <PeptideSequence>DAENTVRGR</PeptideSequence> | |
132 </Peptide> | |
133 <Peptide id="Pep9"> | |
134 <PeptideSequence>EEEELRRLADSIYK</PeptideSequence> | |
135 </Peptide> | |
136 <Peptide id="Pep10"> | |
137 <PeptideSequence>NGQVWEESLKRLRR</PeptideSequence> | |
138 </Peptide> | |
139 <Peptide id="Pep11"> | |
140 <PeptideSequence>GFGRGCERCSFPK</PeptideSequence> | |
141 <Modification monoisotopicMassDelta="57.021463735" location="6"> | |
142 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/> | |
143 </Modification> | |
144 <Modification monoisotopicMassDelta="57.021463735" location="9"> | |
145 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/> | |
146 </Modification> | |
147 </Peptide> | |
148 <Peptide id="Pep12"> | |
149 <PeptideSequence>SLAMEWLEDIYAR</PeptideSequence> | |
150 </Peptide> | |
151 <Peptide id="Pep13"> | |
152 <PeptideSequence>RISSYDDR</PeptideSequence> | |
153 </Peptide> | |
154 <Peptide id="Pep14"> | |
155 <PeptideSequence>ACQVYIQHMR</PeptideSequence> | |
156 <Modification monoisotopicMassDelta="57.021463735" location="2"> | |
157 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/> | |
158 </Modification> | |
159 </Peptide> | |
160 <Peptide id="Pep15"> | |
161 <PeptideSequence>TFAHTIDLLAPR</PeptideSequence> | |
162 </Peptide> | |
163 <Peptide id="Pep16"> | |
164 <PeptideSequence>RGEACLDLLCESEER</PeptideSequence> | |
165 <Modification monoisotopicMassDelta="57.021463735" location="5"> | |
166 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/> | |
167 </Modification> | |
168 <Modification monoisotopicMassDelta="57.021463735" location="10"> | |
169 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/> | |
170 </Modification> | |
171 </Peptide> | |
172 <Peptide id="Pep17"> | |
173 <PeptideSequence>YRPDLVDMER</PeptideSequence> | |
174 </Peptide> | |
175 <Peptide id="Pep18"> | |
176 <PeptideSequence>YDQERLR</PeptideSequence> | |
177 </Peptide> | |
178 <Peptide id="Pep19"> | |
179 <PeptideSequence>LEECEQR</PeptideSequence> | |
180 <Modification monoisotopicMassDelta="57.021463735" location="4"> | |
181 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/> | |
182 </Modification> | |
183 </Peptide> | |
184 <Peptide id="Pep20"> | |
185 <PeptideSequence>KAMGSNMEK</PeptideSequence> | |
186 </Peptide> | |
187 <Peptide id="Pep21"> | |
188 <PeptideSequence>AFYAAVAADCFRDGVR</PeptideSequence> | |
189 <Modification monoisotopicMassDelta="57.021463735" location="10"> | |
190 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/> | |
191 </Modification> | |
192 </Peptide> | |
193 <Peptide id="Pep22"> | |
194 <PeptideSequence>TFAHQENGK</PeptideSequence> | |
195 </Peptide> | |
196 <Peptide id="Pep23"> | |
197 <PeptideSequence>METESLQTKK</PeptideSequence> | |
198 </Peptide> | |
199 <Peptide id="Pep24"> | |
200 <PeptideSequence>VNSGCMAMENK</PeptideSequence> | |
201 <Modification monoisotopicMassDelta="57.021463735" location="5"> | |
202 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/> | |
203 </Modification> | |
204 </Peptide> | |
205 <Peptide id="Pep25"> | |
206 <PeptideSequence>KQEETERTK</PeptideSequence> | |
207 </Peptide> | |
208 <Peptide id="Pep26"> | |
209 <PeptideSequence>EEEEYEVPVWYR</PeptideSequence> | |
210 </Peptide> | |
211 <Peptide id="Pep27"> | |
212 <PeptideSequence>CFHAWSTFR</PeptideSequence> | |
213 <Modification monoisotopicMassDelta="57.021463735" location="1"> | |
214 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/> | |
215 </Modification> | |
216 </Peptide> | |
217 <Peptide id="Pep28"> | |
218 <PeptideSequence>DTEGFLEENQTK</PeptideSequence> | |
219 </Peptide> | |
220 <Peptide id="Pep29"> | |
221 <PeptideSequence>EVESLMAKSR</PeptideSequence> | |
222 </Peptide> | |
223 <Peptide id="Pep30"> | |
224 <PeptideSequence>GCEDCVCPK</PeptideSequence> | |
225 <Modification monoisotopicMassDelta="57.021463735" location="2"> | |
226 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/> | |
227 </Modification> | |
228 <Modification monoisotopicMassDelta="57.021463735" location="5"> | |
229 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/> | |
230 </Modification> | |
231 <Modification monoisotopicMassDelta="57.021463735" location="7"> | |
232 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/> | |
233 </Modification> | |
234 </Peptide> | |
235 <Peptide id="Pep31"> | |
236 <PeptideSequence>ATEEQLK</PeptideSequence> | |
237 </Peptide> | |
238 <Peptide id="Pep32"> | |
239 <PeptideSequence>KLVQVTGTRKGLEK</PeptideSequence> | |
240 </Peptide> | |
241 <Peptide id="Pep33"> | |
242 <PeptideSequence>HDVGGFMVVSGEPK</PeptideSequence> | |
243 </Peptide> | |
244 <Peptide id="Pep34"> | |
245 <PeptideSequence>QFSHPETK</PeptideSequence> | |
246 </Peptide> | |
247 <Peptide id="Pep35"> | |
248 <PeptideSequence>DDSITEQNLK</PeptideSequence> | |
249 </Peptide> | |
250 <Peptide id="Pep36"> | |
251 <PeptideSequence>MSVADLDAR</PeptideSequence> | |
252 </Peptide> | |
253 <Peptide id="Pep37"> | |
254 <PeptideSequence>TEPHSFQR</PeptideSequence> | |
255 </Peptide> | |
256 <PeptideEvidence isDecoy="true" post="I" pre="R" end="621" start="607" peptide_ref="Pep1" dBSequence_ref="DBSeq83632" id="PepEv_84238_1_607"/> | |
257 <PeptideEvidence isDecoy="true" post="I" pre="R" end="617" start="603" peptide_ref="Pep1" dBSequence_ref="DBSeq84448" id="PepEv_85050_1_603"/> | |
258 <PeptideEvidence isDecoy="true" post="I" pre="R" end="572" start="558" peptide_ref="Pep1" dBSequence_ref="DBSeq85260" id="PepEv_85817_1_558"/> | |
259 <PeptideEvidence isDecoy="true" post="I" pre="R" end="432" start="418" peptide_ref="Pep1" dBSequence_ref="DBSeq93486" id="PepEv_93903_1_418"/> | |
260 <PeptideEvidence isDecoy="false" post="F" pre="K" end="224" start="213" peptide_ref="Pep2" dBSequence_ref="DBSeq46845" id="PepEv_47057_2_213"/> | |
261 <PeptideEvidence isDecoy="false" post="C" pre="K" end="580" start="569" peptide_ref="Pep3" dBSequence_ref="DBSeq43937" id="PepEv_44505_3_569"/> | |
262 <PeptideEvidence isDecoy="true" post="E" pre="R" end="149" start="141" peptide_ref="Pep4" dBSequence_ref="DBSeq56223" id="PepEv_56363_4_141"/> | |
263 <PeptideEvidence isDecoy="true" post="E" pre="R" end="149" start="141" peptide_ref="Pep4" dBSequence_ref="DBSeq56840" id="PepEv_56980_4_141"/> | |
264 <PeptideEvidence isDecoy="true" post="E" pre="R" end="149" start="141" peptide_ref="Pep4" dBSequence_ref="DBSeq57457" id="PepEv_57597_4_141"/> | |
265 <PeptideEvidence isDecoy="true" post="E" pre="R" end="149" start="141" peptide_ref="Pep4" dBSequence_ref="DBSeq58074" id="PepEv_58214_4_141"/> | |
266 <PeptideEvidence isDecoy="true" post="E" pre="R" end="149" start="141" peptide_ref="Pep4" dBSequence_ref="DBSeq58690" id="PepEv_58830_4_141"/> | |
267 <PeptideEvidence isDecoy="true" post="E" pre="R" end="149" start="141" peptide_ref="Pep4" dBSequence_ref="DBSeq59287" id="PepEv_59427_4_141"/> | |
268 <PeptideEvidence isDecoy="true" post="E" pre="R" end="149" start="141" peptide_ref="Pep4" dBSequence_ref="DBSeq79979" id="PepEv_80119_4_141"/> | |
269 <PeptideEvidence isDecoy="true" post="E" pre="R" end="149" start="141" peptide_ref="Pep4" dBSequence_ref="DBSeq80596" id="PepEv_80736_4_141"/> | |
270 <PeptideEvidence isDecoy="true" post="E" pre="R" end="149" start="141" peptide_ref="Pep4" dBSequence_ref="DBSeq81213" id="PepEv_81353_4_141"/> | |
271 <PeptideEvidence isDecoy="true" post="E" pre="R" end="149" start="141" peptide_ref="Pep4" dBSequence_ref="DBSeq81830" id="PepEv_81970_4_141"/> | |
272 <PeptideEvidence isDecoy="true" post="E" pre="R" end="149" start="141" peptide_ref="Pep4" dBSequence_ref="DBSeq82446" id="PepEv_82586_4_141"/> | |
273 <PeptideEvidence isDecoy="true" post="E" pre="R" end="149" start="141" peptide_ref="Pep4" dBSequence_ref="DBSeq83043" id="PepEv_83183_4_141"/> | |
274 <PeptideEvidence isDecoy="true" post="S" pre="K" end="40" start="33" peptide_ref="Pep5" dBSequence_ref="DBSeq64736" id="PepEv_64768_5_33"/> | |
275 <PeptideEvidence isDecoy="false" post="D" pre="R" end="7211" start="7202" peptide_ref="Pep6" dBSequence_ref="DBSeq9505" id="PepEv_16706_6_7202"/> | |
276 <PeptideEvidence isDecoy="false" post="D" pre="R" end="5165" start="5156" peptide_ref="Pep6" dBSequence_ref="DBSeq17116" id="PepEv_22271_6_5156"/> | |
277 <PeptideEvidence isDecoy="false" post="D" pre="R" end="5089" start="5080" peptide_ref="Pep6" dBSequence_ref="DBSeq38514" id="PepEv_43593_6_5080"/> | |
278 <PeptideEvidence isDecoy="true" post="G" pre="K" end="176" start="168" peptide_ref="Pep7" dBSequence_ref="DBSeq100520" id="PepEv_100687_7_168"/> | |
279 <PeptideEvidence isDecoy="false" post="L" pre="R" end="2541" start="2533" peptide_ref="Pep8" dBSequence_ref="DBSeq9505" id="PepEv_12037_8_2533"/> | |
280 <PeptideEvidence isDecoy="true" post="V" pre="K" end="6129" start="6116" peptide_ref="Pep9" dBSequence_ref="DBSeq65480" id="PepEv_71595_9_6116"/> | |
281 <PeptideEvidence isDecoy="true" post="V" pre="K" end="4019" start="4006" peptide_ref="Pep9" dBSequence_ref="DBSeq73091" id="PepEv_77096_9_4006"/> | |
282 <PeptideEvidence isDecoy="true" post="V" pre="K" end="4019" start="4006" peptide_ref="Pep9" dBSequence_ref="DBSeq94489" id="PepEv_98494_9_4006"/> | |
283 <PeptideEvidence isDecoy="false" post="D" pre="R" end="156" start="143" peptide_ref="Pep10" dBSequence_ref="DBSeq31093" id="PepEv_31235_10_143"/> | |
284 <PeptideEvidence isDecoy="false" post="D" pre="R" end="100" start="87" peptide_ref="Pep10" dBSequence_ref="DBSeq31862" id="PepEv_31948_10_87"/> | |
285 <PeptideEvidence isDecoy="false" post="D" pre="R" end="100" start="87" peptide_ref="Pep10" dBSequence_ref="DBSeq47665" id="PepEv_47751_10_87"/> | |
286 <PeptideEvidence isDecoy="true" post="E" pre="R" end="345" start="333" peptide_ref="Pep11" dBSequence_ref="DBSeq56223" id="PepEv_56555_11_333"/> | |
287 <PeptideEvidence isDecoy="true" post="E" pre="R" end="345" start="333" peptide_ref="Pep11" dBSequence_ref="DBSeq56840" id="PepEv_57172_11_333"/> | |
288 <PeptideEvidence isDecoy="true" post="E" pre="R" end="345" start="333" peptide_ref="Pep11" dBSequence_ref="DBSeq57457" id="PepEv_57789_11_333"/> | |
289 <PeptideEvidence isDecoy="true" post="E" pre="R" end="345" start="333" peptide_ref="Pep11" dBSequence_ref="DBSeq58074" id="PepEv_58406_11_333"/> | |
290 <PeptideEvidence isDecoy="true" post="E" pre="R" end="345" start="333" peptide_ref="Pep11" dBSequence_ref="DBSeq58690" id="PepEv_59022_11_333"/> | |
291 <PeptideEvidence isDecoy="true" post="E" pre="R" end="345" start="333" peptide_ref="Pep11" dBSequence_ref="DBSeq59287" id="PepEv_59619_11_333"/> | |
292 <PeptideEvidence isDecoy="true" post="E" pre="R" end="345" start="333" peptide_ref="Pep11" dBSequence_ref="DBSeq79979" id="PepEv_80311_11_333"/> | |
293 <PeptideEvidence isDecoy="true" post="E" pre="R" end="345" start="333" peptide_ref="Pep11" dBSequence_ref="DBSeq80596" id="PepEv_80928_11_333"/> | |
294 <PeptideEvidence isDecoy="true" post="E" pre="R" end="345" start="333" peptide_ref="Pep11" dBSequence_ref="DBSeq81213" id="PepEv_81545_11_333"/> | |
295 <PeptideEvidence isDecoy="true" post="E" pre="R" end="345" start="333" peptide_ref="Pep11" dBSequence_ref="DBSeq81830" id="PepEv_82162_11_333"/> | |
296 <PeptideEvidence isDecoy="true" post="E" pre="R" end="345" start="333" peptide_ref="Pep11" dBSequence_ref="DBSeq82446" id="PepEv_82778_11_333"/> | |
297 <PeptideEvidence isDecoy="true" post="E" pre="R" end="345" start="333" peptide_ref="Pep11" dBSequence_ref="DBSeq83043" id="PepEv_83375_11_333"/> | |
298 <PeptideEvidence isDecoy="true" post="N" pre="K" end="449" start="437" peptide_ref="Pep12" dBSequence_ref="DBSeq83632" id="PepEv_84068_12_437"/> | |
299 <PeptideEvidence isDecoy="true" post="N" pre="K" end="445" start="433" peptide_ref="Pep12" dBSequence_ref="DBSeq84448" id="PepEv_84880_12_433"/> | |
300 <PeptideEvidence isDecoy="true" post="N" pre="K" end="400" start="388" peptide_ref="Pep12" dBSequence_ref="DBSeq85260" id="PepEv_85647_12_388"/> | |
301 <PeptideEvidence isDecoy="true" post="N" pre="K" end="260" start="248" peptide_ref="Pep12" dBSequence_ref="DBSeq93486" id="PepEv_93733_12_248"/> | |
302 <PeptideEvidence isDecoy="false" post="F" pre="K" end="566" start="559" peptide_ref="Pep13" dBSequence_ref="DBSeq49855" id="PepEv_50413_13_559"/> | |
303 <PeptideEvidence isDecoy="false" post="F" pre="K" end="523" start="516" peptide_ref="Pep13" dBSequence_ref="DBSeq50575" id="PepEv_51090_13_516"/> | |
304 <PeptideEvidence isDecoy="false" post="F" pre="K" end="523" start="516" peptide_ref="Pep13" dBSequence_ref="DBSeq54922" id="PepEv_55437_13_516"/> | |
305 <PeptideEvidence isDecoy="false" post="S" pre="K" end="1215" start="1206" peptide_ref="Pep14" dBSequence_ref="DBSeq4600" id="PepEv_5805_14_1206"/> | |
306 <PeptideEvidence isDecoy="false" post="S" pre="K" end="1160" start="1151" peptide_ref="Pep14" dBSequence_ref="DBSeq5853" id="PepEv_7003_14_1151"/> | |
307 <PeptideEvidence isDecoy="false" post="S" pre="K" end="1262" start="1253" peptide_ref="Pep14" dBSequence_ref="DBSeq33873" id="PepEv_35125_14_1253"/> | |
308 <PeptideEvidence isDecoy="true" post="T" pre="K" end="406" start="395" peptide_ref="Pep15" dBSequence_ref="DBSeq104353" id="PepEv_104747_15_395"/> | |
309 <PeptideEvidence isDecoy="true" post="T" pre="K" end="406" start="395" peptide_ref="Pep15" dBSequence_ref="DBSeq107227" id="PepEv_107621_15_395"/> | |
310 <PeptideEvidence isDecoy="true" post="T" pre="K" end="406" start="395" peptide_ref="Pep15" dBSequence_ref="DBSeq108359" id="PepEv_108753_15_395"/> | |
311 <PeptideEvidence isDecoy="true" post="T" pre="K" end="406" start="395" peptide_ref="Pep15" dBSequence_ref="DBSeq109459" id="PepEv_109853_15_395"/> | |
312 <PeptideEvidence isDecoy="true" post="W" pre="K" end="527" start="513" peptide_ref="Pep16" dBSequence_ref="DBSeq58074" id="PepEv_58586_16_513"/> | |
313 <PeptideEvidence isDecoy="true" post="W" pre="K" end="527" start="513" peptide_ref="Pep16" dBSequence_ref="DBSeq81830" id="PepEv_82342_16_513"/> | |
314 <PeptideEvidence isDecoy="false" post="V" pre="R" end="321" start="312" peptide_ref="Pep17" dBSequence_ref="DBSeq9505" id="PepEv_9816_17_312"/> | |
315 <PeptideEvidence isDecoy="false" post="V" pre="R" end="321" start="312" peptide_ref="Pep17" dBSequence_ref="DBSeq17116" id="PepEv_17427_17_312"/> | |
316 <PeptideEvidence isDecoy="false" post="V" pre="R" end="245" start="236" peptide_ref="Pep17" dBSequence_ref="DBSeq38514" id="PepEv_38749_17_236"/> | |
317 <PeptideEvidence isDecoy="true" post="W" pre="K" end="403" start="397" peptide_ref="Pep18" dBSequence_ref="DBSeq59954" id="PepEv_60350_18_397"/> | |
318 <PeptideEvidence isDecoy="true" post="W" pre="K" end="409" start="403" peptide_ref="Pep18" dBSequence_ref="DBSeq86441" id="PepEv_86843_18_403"/> | |
319 <PeptideEvidence isDecoy="false" post="L" pre="R" end="1144" start="1138" peptide_ref="Pep19" dBSequence_ref="DBSeq9505" id="PepEv_10642_19_1138"/> | |
320 <PeptideEvidence isDecoy="false" post="L" pre="R" end="1142" start="1136" peptide_ref="Pep19" dBSequence_ref="DBSeq17116" id="PepEv_18251_19_1136"/> | |
321 <PeptideEvidence isDecoy="false" post="L" pre="R" end="1066" start="1060" peptide_ref="Pep19" dBSequence_ref="DBSeq38514" id="PepEv_39573_19_1060"/> | |
322 <PeptideEvidence isDecoy="true" post="V" pre="K" end="374" start="366" peptide_ref="Pep20" dBSequence_ref="DBSeq104353" id="PepEv_104718_20_366"/> | |
323 <PeptideEvidence isDecoy="true" post="V" pre="K" end="374" start="366" peptide_ref="Pep20" dBSequence_ref="DBSeq107227" id="PepEv_107592_20_366"/> | |
324 <PeptideEvidence isDecoy="true" post="V" pre="K" end="374" start="366" peptide_ref="Pep20" dBSequence_ref="DBSeq108359" id="PepEv_108724_20_366"/> | |
325 <PeptideEvidence isDecoy="true" post="V" pre="K" end="374" start="366" peptide_ref="Pep20" dBSequence_ref="DBSeq109459" id="PepEv_109824_20_366"/> | |
326 <PeptideEvidence isDecoy="false" post="S" pre="K" end="761" start="746" peptide_ref="Pep21" dBSequence_ref="DBSeq48378" id="PepEv_49123_21_746"/> | |
327 <PeptideEvidence isDecoy="false" post="S" pre="K" end="793" start="778" peptide_ref="Pep21" dBSequence_ref="DBSeq51252" id="PepEv_52029_21_778"/> | |
328 <PeptideEvidence isDecoy="false" post="S" pre="K" end="761" start="746" peptide_ref="Pep21" dBSequence_ref="DBSeq52384" id="PepEv_53129_21_746"/> | |
329 <PeptideEvidence isDecoy="false" post="S" pre="K" end="761" start="746" peptide_ref="Pep21" dBSequence_ref="DBSeq53484" id="PepEv_54229_21_746"/> | |
330 <PeptideEvidence isDecoy="true" post="R" pre="R" end="23" start="15" peptide_ref="Pep22" dBSequence_ref="DBSeq60575" id="PepEv_60589_22_15"/> | |
331 <PeptideEvidence isDecoy="true" post="R" pre="R" end="23" start="15" peptide_ref="Pep22" dBSequence_ref="DBSeq61828" id="PepEv_61842_22_15"/> | |
332 <PeptideEvidence isDecoy="true" post="R" pre="R" end="23" start="15" peptide_ref="Pep22" dBSequence_ref="DBSeq89848" id="PepEv_89862_22_15"/> | |
333 <PeptideEvidence isDecoy="true" post="E" pre="R" end="140" start="131" peptide_ref="Pep23" dBSequence_ref="DBSeq64736" id="PepEv_64866_23_131"/> | |
334 <PeptideEvidence isDecoy="false" post="L" pre="R" end="5165" start="5155" peptide_ref="Pep24" dBSequence_ref="DBSeq9505" id="PepEv_14659_24_5155"/> | |
335 <PeptideEvidence isDecoy="false" post="L" pre="R" end="3123" start="3113" peptide_ref="Pep24" dBSequence_ref="DBSeq17116" id="PepEv_20228_24_3113"/> | |
336 <PeptideEvidence isDecoy="false" post="L" pre="R" end="3047" start="3037" peptide_ref="Pep24" dBSequence_ref="DBSeq38514" id="PepEv_41550_24_3037"/> | |
337 <PeptideEvidence isDecoy="true" post="L" pre="R" end="469" start="461" peptide_ref="Pep25" dBSequence_ref="DBSeq103081" id="PepEv_103541_25_461"/> | |
338 <PeptideEvidence isDecoy="true" post="C" pre="K" end="330" start="319" peptide_ref="Pep26" dBSequence_ref="DBSeq60575" id="PepEv_60893_26_319"/> | |
339 <PeptideEvidence isDecoy="true" post="C" pre="K" end="330" start="319" peptide_ref="Pep26" dBSequence_ref="DBSeq61828" id="PepEv_62146_26_319"/> | |
340 <PeptideEvidence isDecoy="true" post="C" pre="K" end="330" start="319" peptide_ref="Pep26" dBSequence_ref="DBSeq89848" id="PepEv_90166_26_319"/> | |
341 <PeptideEvidence isDecoy="false" post="Q" pre="R" end="1248" start="1240" peptide_ref="Pep27" dBSequence_ref="DBSeq4600" id="PepEv_5839_27_1240"/> | |
342 <PeptideEvidence isDecoy="false" post="Q" pre="R" end="1193" start="1185" peptide_ref="Pep27" dBSequence_ref="DBSeq5853" id="PepEv_7037_27_1185"/> | |
343 <PeptideEvidence isDecoy="false" post="Q" pre="R" end="1295" start="1287" peptide_ref="Pep27" dBSequence_ref="DBSeq33873" id="PepEv_35159_27_1287"/> | |
344 <PeptideEvidence isDecoy="false" post="L" pre="K" end="3741" start="3730" peptide_ref="Pep28" dBSequence_ref="DBSeq9505" id="PepEv_13234_28_3730"/> | |
345 <PeptideEvidence isDecoy="false" post="L" pre="K" end="1699" start="1688" peptide_ref="Pep28" dBSequence_ref="DBSeq17116" id="PepEv_18803_28_1688"/> | |
346 <PeptideEvidence isDecoy="false" post="L" pre="K" end="1623" start="1612" peptide_ref="Pep28" dBSequence_ref="DBSeq38514" id="PepEv_40125_28_1612"/> | |
347 <PeptideEvidence isDecoy="true" post="L" pre="K" end="2619" start="2610" peptide_ref="Pep29" dBSequence_ref="DBSeq65480" id="PepEv_68089_29_2610"/> | |
348 <PeptideEvidence isDecoy="true" post="L" pre="K" end="2549" start="2540" peptide_ref="Pep29" dBSequence_ref="DBSeq73091" id="PepEv_75630_29_2540"/> | |
349 <PeptideEvidence isDecoy="true" post="L" pre="K" end="2549" start="2540" peptide_ref="Pep29" dBSequence_ref="DBSeq94489" id="PepEv_97028_29_2540"/> | |
350 <PeptideEvidence isDecoy="true" post="E" pre="R" end="65" start="57" peptide_ref="Pep30" dBSequence_ref="DBSeq56223" id="PepEv_56279_30_57"/> | |
351 <PeptideEvidence isDecoy="true" post="E" pre="R" end="65" start="57" peptide_ref="Pep30" dBSequence_ref="DBSeq56840" id="PepEv_56896_30_57"/> | |
352 <PeptideEvidence isDecoy="true" post="E" pre="R" end="65" start="57" peptide_ref="Pep30" dBSequence_ref="DBSeq57457" id="PepEv_57513_30_57"/> | |
353 <PeptideEvidence isDecoy="true" post="E" pre="R" end="65" start="57" peptide_ref="Pep30" dBSequence_ref="DBSeq58074" id="PepEv_58130_30_57"/> | |
354 <PeptideEvidence isDecoy="true" post="E" pre="R" end="65" start="57" peptide_ref="Pep30" dBSequence_ref="DBSeq58690" id="PepEv_58746_30_57"/> | |
355 <PeptideEvidence isDecoy="true" post="E" pre="R" end="65" start="57" peptide_ref="Pep30" dBSequence_ref="DBSeq59287" id="PepEv_59343_30_57"/> | |
356 <PeptideEvidence isDecoy="true" post="E" pre="R" end="65" start="57" peptide_ref="Pep30" dBSequence_ref="DBSeq79979" id="PepEv_80035_30_57"/> | |
357 <PeptideEvidence isDecoy="true" post="E" pre="R" end="65" start="57" peptide_ref="Pep30" dBSequence_ref="DBSeq80596" id="PepEv_80652_30_57"/> | |
358 <PeptideEvidence isDecoy="true" post="E" pre="R" end="65" start="57" peptide_ref="Pep30" dBSequence_ref="DBSeq81213" id="PepEv_81269_30_57"/> | |
359 <PeptideEvidence isDecoy="true" post="E" pre="R" end="65" start="57" peptide_ref="Pep30" dBSequence_ref="DBSeq81830" id="PepEv_81886_30_57"/> | |
360 <PeptideEvidence isDecoy="true" post="E" pre="R" end="65" start="57" peptide_ref="Pep30" dBSequence_ref="DBSeq82446" id="PepEv_82502_30_57"/> | |
361 <PeptideEvidence isDecoy="true" post="E" pre="R" end="65" start="57" peptide_ref="Pep30" dBSequence_ref="DBSeq83043" id="PepEv_83099_30_57"/> | |
362 <PeptideEvidence isDecoy="false" post="T" pre="K" end="568" start="562" peptide_ref="Pep31" dBSequence_ref="DBSeq43937" id="PepEv_44498_31_562"/> | |
363 <PeptideEvidence isDecoy="true" post="Q" pre="R" end="750" start="737" peptide_ref="Pep32" dBSequence_ref="DBSeq65480" id="PepEv_66216_32_737"/> | |
364 <PeptideEvidence isDecoy="true" post="Q" pre="R" end="680" start="667" peptide_ref="Pep32" dBSequence_ref="DBSeq73091" id="PepEv_73757_32_667"/> | |
365 <PeptideEvidence isDecoy="true" post="Q" pre="R" end="680" start="667" peptide_ref="Pep32" dBSequence_ref="DBSeq94489" id="PepEv_95155_32_667"/> | |
366 <PeptideEvidence isDecoy="true" post="Y" pre="R" end="166" start="153" peptide_ref="Pep33" dBSequence_ref="DBSeq105453" id="PepEv_105605_33_153"/> | |
367 <PeptideEvidence isDecoy="true" post="N" pre="R" end="166" start="153" peptide_ref="Pep33" dBSequence_ref="DBSeq111574" id="PepEv_111726_33_153"/> | |
368 <PeptideEvidence isDecoy="false" post="E" pre="R" end="2635" start="2628" peptide_ref="Pep34" dBSequence_ref="DBSeq9505" id="PepEv_12132_34_2628"/> | |
369 <PeptideEvidence isDecoy="true" post="E" pre="R" end="4534" start="4525" peptide_ref="Pep35" dBSequence_ref="DBSeq65480" id="PepEv_70004_35_4525"/> | |
370 <PeptideEvidence isDecoy="true" post="L" pre="K" end="6428" start="6420" peptide_ref="Pep36" dBSequence_ref="DBSeq65480" id="PepEv_71899_36_6420"/> | |
371 <PeptideEvidence isDecoy="true" post="L" pre="K" end="4318" start="4310" peptide_ref="Pep36" dBSequence_ref="DBSeq73091" id="PepEv_77400_36_4310"/> | |
372 <PeptideEvidence isDecoy="true" post="L" pre="K" end="4318" start="4310" peptide_ref="Pep36" dBSequence_ref="DBSeq94489" id="PepEv_98798_36_4310"/> | |
373 <PeptideEvidence isDecoy="true" post="L" pre="K" end="4984" start="4977" peptide_ref="Pep37" dBSequence_ref="DBSeq65480" id="PepEv_70456_37_4977"/> | |
374 </SequenceCollection> | |
375 <AnalysisCollection xmlns="http://psidev.info/psi/pi/mzIdentML/1.1"> | |
376 <SpectrumIdentification spectrumIdentificationList_ref="SI_LIST_1" spectrumIdentificationProtocol_ref="SearchProtocol_1" id="SpecIdent_1"> | |
377 <InputSpectra spectraData_ref="SID_1"/> | |
378 <SearchDatabaseRef searchDatabase_ref="SearchDB_1"/> | |
379 </SpectrumIdentification> | |
380 </AnalysisCollection> | |
381 <AnalysisProtocolCollection xmlns="http://psidev.info/psi/pi/mzIdentML/1.1"> | |
382 <SpectrumIdentificationProtocol analysisSoftware_ref="ID_software" id="SearchProtocol_1"> | |
383 <SearchType> | |
384 <cvParam accession="MS:1001083" cvRef="PSI-MS" name="ms-ms search"/> | |
385 </SearchType> | |
386 <AdditionalSearchParams> | |
387 <cvParam accession="MS:1001211" cvRef="PSI-MS" name="parent mass type mono"/> | |
388 <cvParam accession="MS:1001256" cvRef="PSI-MS" name="fragment mass type mono"/> | |
389 <userParam value="true" name="TargetDecoyApproach"/> | |
390 <userParam value="0" name="MinIsotopeError"/> | |
391 <userParam value="1" name="MaxIsotopeError"/> | |
392 <userParam value="As written in the spectrum or CID if no info" name="FragmentMethod"/> | |
393 <userParam value="LowRes" name="Instrument"/> | |
394 <userParam value="Automatic" name="Protocol"/> | |
395 <userParam value="2" name="NumTolerableTermini"/> | |
396 <userParam value="1" name="NumMatchesPerSpec"/> | |
397 <userParam value="2" name="MaxNumModifications"/> | |
398 <userParam value="6" name="MinPepLength"/> | |
399 <userParam value="40" name="MaxPepLength"/> | |
400 <userParam value="2" name="MinCharge"/> | |
401 <userParam value="3" name="MaxCharge"/> | |
402 </AdditionalSearchParams> | |
403 <ModificationParams> | |
404 <SearchModification residues="C" massDelta="57.021465" fixedMod="true"> | |
405 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/> | |
406 </SearchModification> | |
407 </ModificationParams> | |
408 <Enzymes> | |
409 <Enzyme missedCleavages="1000" semiSpecific="false" id="Tryp"> | |
410 <EnzymeName> | |
411 <cvParam accession="MS:1001251" cvRef="PSI-MS" name="Trypsin"/> | |
412 </EnzymeName> | |
413 </Enzyme> | |
414 </Enzymes> | |
415 <ParentTolerance> | |
416 <cvParam accession="MS:1001412" cvRef="PSI-MS" unitCvRef="UO" unitName="parts per million" unitAccession="UO:0000169" value="10.0" name="search tolerance plus value"/> | |
417 <cvParam accession="MS:1001413" cvRef="PSI-MS" unitCvRef="UO" unitName="parts per million" unitAccession="UO:0000169" value="10.0" name="search tolerance minus value"/> | |
418 </ParentTolerance> | |
419 <Threshold> | |
420 <cvParam accession="MS:1001494" cvRef="PSI-MS" name="no threshold"/> | |
421 </Threshold> | |
422 </SpectrumIdentificationProtocol> | |
423 </AnalysisProtocolCollection> | |
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