Mercurial > repos > galaxyp > eggnog_mapper
view test-data/eggnogg_tiny.sh @ 12:a5d5e84eed93 draft default tip
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/eggnog_mapper/eggnog_mapper commit 0e3cff872b53efe21cbf4905ed0b072337192001
| author | galaxyp |
|---|---|
| date | Mon, 19 Jan 2026 22:22:38 +0000 |
| parents | 9d426cb7823b |
| children |
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#!/bin/bash # Script adapted from https://github.com/galaxyproteomics/egglet to produce a minimal eggnog 5.0.2 database sqlite3 $1 << "EOF" CREATE TEMP TABLE og AS SELECT * FROM og WHERE description = 'Cytidylyltransferase' AND level LIKE "651137" LIMIT 1; CREATE TEMP TABLE event AS SELECT * FROM event WHERE level=651137 AND og='41T2K' LIMIT 20; CREATE TEMP TABLE prots AS SELECT * FROM prots WHERE name = "436308.Nmar_0135"; CREATE TEMP TABLE version AS SELECT * FROM version; .backup temp eggnog_tiny.db EOF
