Mercurial > repos > galaxyp > dbbuilder

diff dbbuilder.xml @ 2:0127e0bdf937 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/dbbuilder commit 7480b93ed88eb017041b16e1181a481f7b3334d3
author galaxyp
date Tue, 02 May 2017 08:51:48 -0400
parents a2c05481cae2
children 643d9192e3f5
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line diff
--- a/dbbuilder.xml	Mon May 01 16:52:19 2017 -0400
+++ b/dbbuilder.xml	Tue May 02 08:51:48 2017 -0400
@@ -14,7 +14,7 @@
     <command>
 <![CDATA[
         #if $source.from == "uniprot"
-            #set $url = "http://www.uniprot.org/uniprot/?query=taxonomy%3a%22" + str($source.taxon) + "%22" + str($source.set) + str($source.reviewed) + "&force=yes&format=fasta" + str($source.include_isoform)
+            #set $url = 'http://www.uniprot.org/uniprot/?query=taxonomy:"' + str($source.taxon) + '"' + str($source.set) + str($source.reviewed) + '&force=yes&format=fasta' + str($source.include_isoform)
             #set $type = "direct"
         #elif $source.from == "cRAP"
             ##set $url = "ftp://ftp.thegpm.org/fasta/cRAP/crap.fasta"