|
22
|
1 <?xml version="1.0"?>
|
|
|
2 <tool_dependency>
|
|
|
3 <package name="R_3_0_2" version="3.0.2">
|
|
|
4 <repository changeset_revision="b6fe8ca3230d" name="package_r_3_0_2" owner="iuc" prior_installation_required="True" toolshed="testtoolshed.g2.bx.psu.edu"/>
|
|
|
5 </package>
|
|
|
6 <package name="DESeq2biomaRt" version="1.0">
|
|
|
7 <install version="1.0">
|
|
|
8 <actions>
|
|
|
9 <action type="set_environment_for_install">
|
|
|
10 <repository changeset_revision="b6fe8ca3230d" name="package_r_3_0_2" owner="iuc" prior_installation_required="True" toolshed="testtoolshed.g2.bx.psu.edu">
|
|
|
11 <package name="R_3_0_2" version="3.0.2"/>
|
|
|
12 </repository>
|
|
|
13 </action>
|
|
|
14 <action type="shell_command">R CMD BATCH DESeq2biomaRt.R</action>
|
|
|
15 <!--<action type="shell_command">echo "export PATH=$PATH" > $INSTALL_DIR/env.sh </action>-->
|
|
|
16 <!--<action type="shell_command">chmod 755 $INSTALL_DIR/env.sh </action>-->
|
|
|
17 </actions>
|
|
|
18 </install>
|
|
|
19 <readme>
|
|
|
20 </readme>
|
|
|
21 </package>
|
|
|
22 </tool_dependency>
|
