Mercurial > repos > drosofff > msp_sr_bowtie

diff sRbowtie.xml @ 23:411b6453b5d0 draft

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planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/msp_sr_bowtie commit 7249152d2d55b0818bb870330a7c2be00cacf449
author drosofff
date Tue, 27 Jun 2017 04:49:57 -0400
parents 764181d43c36
children 2f4e22f2177d
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line diff
--- a/sRbowtie.xml	Tue Jun 27 04:33:53 2017 -0400
+++ b/sRbowtie.xml	Tue Jun 27 04:49:57 2017 -0400
@@ -5,7 +5,7 @@
         <requirement type="package" version="1.2">samtools</requirement>
     </requirements>
     <command detect_errors="exit_code"><![CDATA[
-        #if $refGenomeSource.genomeSource == "history":
+        #if str($refGenomeSource.genomeSource) == "history":
             bowtie-build -f '$refGenomeSource.ownFile' local_index &&
         #else:
             ln -f -s '$refGenomeSource.index.fields.path' local_index &&