Mercurial > repos > dfornika > tetyper

changeset 4:ae8f5a2e723a draft

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Uploaded
author dfornika
date Sat, 23 Nov 2019 04:19:45 +0000
parents 9d2ddea2cde9
children 628c58844832
files tetyper.xml
diffstat 1 files changed, 5 insertions(+), 5 deletions(-) [+]
line wrap: on
line diff
--- a/tetyper.xml	Sat Nov 23 04:15:34 2019 +0000
+++ b/tetyper.xml	Sat Nov 23 04:19:45 2019 +0000
@@ -13,7 +13,7 @@
                 --fq1 '${collection_paired.input_pair.forward}' --fq2 '${collection_paired.input_pair.reverse}'
             #end if
             --ref '${reference}'
-            --flank_length '${flank_length}'
+            --flank_len '${flank_length}'
             --outprefix output
         ]]>
     </command>
@@ -31,12 +31,12 @@
                 <param format="fastq,fastq.gz" name="reverse_input" type="data" label="Reverse strand" help="FASTQ dataset"/>
             </when>
         </conditional>
-        <param name="reference" type="data" format="fasta"/>
-        <param name="flank_length" type="integer" min="4" value="5" max="16"/>
+        <param name="reference" type="data" format="fasta" label="Transposable Element Reference"/>
+        <param name="flank_length" type="integer" min="4" value="5" max="16" label="Flank Length"/>
     </inputs>
     <outputs>
-        <data name="summary" format="tabular" from_work_dir="output_summary.txt" label="${tool.name} on ${on_string} summary"/>
-        <data name="log" format="text" from_work_dir="output.log" label="${tool.name} on ${on_string} summary"/>
+        <data name="summary" format="tabular" from_work_dir="output_summary.txt" label="${tool.name} on ${on_string}: summary"/>
+        <data name="log" format="text" from_work_dir="output.log" label="${tool.name} on ${on_string}: log"/>
     </outputs>
     <tests>
     </tests>