Mercurial > repos > dfornika > ncbi_acc_download

changeset 17:328a48cec6d3 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ncbi_acc_download commit 14fce78ce0471b1033e9821ec428490a76b0ba9f-dirty"
author dfornika
date Fri, 29 Nov 2019 00:00:12 +0000
parents fad041840a03
children ba3ce4445302
files ncbi_acc_download.xml test-data/CP011064.ft test-data/CP011064.gff
diffstat 1 files changed, 3 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/ncbi_acc_download.xml	Thu Nov 28 22:23:23 2019 +0000
+++ b/ncbi_acc_download.xml	Fri Nov 29 00:00:12 2019 +0000
@@ -18,7 +18,9 @@
         ncbi-acc-download
             --molecule '${molecule.select}'
             --format '${molecule.format}'
-            --extended-validation all
+            #if $molecule.format != 'featuretable' and $molecule.format != 'gff3':
+                --extended-validation all
+            #end if
             \${accession} && sleep 5;
         done < ../accessions 2> >(tee -a ../error.log >&2)
     ]]></command>