Mercurial > repos > dfornika > mob_suite

annotate test-data/plasmid_476.fasta_refseqhostrange_asci_tree.txt @ 51:4e818dfe0f23 draft default tip

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"planemo upload for repository https://github.com/phac-nml/mob-suite commit ab13ec30d5f68d86e535356ce452230617d4d7d1-dirty"
author dfornika
date Wed, 11 Dec 2019 22:19:55 +0000
parents 1e4197d25ef6
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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1
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
dfornika
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2 /-species, Shigella sonnei
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
dfornika
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3 /genus, Shigella
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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4 | \-no rank, Shigella dysenteriae 1
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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5 |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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6 | /-no rank, Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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7 | |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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8 | |--no rank, Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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9 | /no rank, Salmonella enterica subsp. enterica serovar Typhimurium
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
dfornika
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10 | | |--no rank, Salmonella enterica subsp. enterica serovar Typhimurium str. CDC 2010K-1587
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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11 | | |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
dfornika
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12 | | \-no rank, Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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13 | |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
dfornika
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14 | | /-no rank, Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1781
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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15 | | |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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16 | |-no rank, Salmonella enterica subsp. enterica serovar Anatum-no rank, Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1783
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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17 | | |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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18 | | \-no rank, Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1727
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
dfornika
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19 | |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
dfornika
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20 | | /-no rank, Salmonella enterica subsp. enterica serovar Heidelberg str. SL476
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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21 | | |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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22 |-species, Salmonella entericasubspecies, Salmonella enterica subsp. entericano rank, Salmonella enterica subsp. enterica serovar Heidelberg-no rank, Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002069
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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23 | | |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
dfornika
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24 | | \-no rank, Salmonella enterica subsp. enterica serovar Heidelberg str. 41578
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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25 | |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
dfornika
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26 | |-no rank, Salmonella enterica subsp. enterica serovar Kentucky-no rank, Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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27 | |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
dfornika
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28 | |--no rank, Salmonella enterica subsp. enterica serovar Enteritidis
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
dfornika
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29 | |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
dfornika
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30 | |--no rank, Salmonella enterica subsp. enterica serovar Ouakam
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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31 | |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
dfornika
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32 | |--no rank, Salmonella enterica subsp. enterica serovar Saintpaul
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
dfornika
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33 /family, Enterobacteriaceae |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
dfornika
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34 | | |--no rank, Salmonella enterica subsp. enterica serovar Newport str. CVM 22462
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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35 | | |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
dfornika
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36 | | \-no rank, Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001588
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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37 | |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
dfornika
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38 | | /-no rank, Escherichia coli W
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
dfornika
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39 | | |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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40 | | | /-no rank, Escherichia coli O104:H4 str. 2011C-3493
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
dfornika
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41 | | |-no rank, Escherichia coli O104:H4
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
dfornika
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42 | | | \-no rank, Escherichia coli O104:H4 str. C227-11
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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43 | | |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
dfornika
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44 | | |--no rank, Escherichia coli KO11FL
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
dfornika
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45 | | |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
dfornika
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46 | | |--no rank, Escherichia coli O25:NM
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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47 | | |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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48 | | |--no rank, Escherichia coli UMNK88
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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49 | | |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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50 -order, Enterobacterales |-species, Escherichia coli-no rank, Escherichia coli PCN061
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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51 | | |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
dfornika
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52 | | |--no rank, Escherichia coli B7A
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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53 | | |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
dfornika
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54 | | |--no rank, Escherichia coli SE11
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
dfornika
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55 | | |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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56 | | |--no rank, Escherichia coli NCCP15648
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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57 | | |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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58 | | |--no rank, Escherichia coli ETEC 1392/75
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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59 | | |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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60 | | |--no rank, Escherichia coli O119:H6
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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61 | | |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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62 | | \-no rank, Escherichia coli O139:H28 str. E24377A
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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63 | |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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64 | \-species, Klebsiella pneumoniae
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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65 |
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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66 | /-species, Serratia marcescens
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
dfornika
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67 \genus, Serratia
1e4197d25ef6 "planemo upload for repository https://github.com/phac-nml/mob-suite commit e7f174176bcd08b8b4abce84e12262c840bc0db2-dirty"
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68 \-species, Serratia sp. SCBI