Mercurial > repos > dfornika > micall_lite

changeset 21:d099ef46fd42 draft

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planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/tools/micall-lite commit 822e7e1c2de31a72c2a13bcc15b9df06b699561f-dirty
author dfornika
date Wed, 25 Sep 2019 18:51:15 -0400
parents b1e1f49ebe14
children b5df889acab3
files amino2consensus.py
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/amino2consensus.py	Wed Sep 25 18:36:16 2019 -0400
+++ b/amino2consensus.py	Wed Sep 25 18:51:15 2019 -0400
@@ -10,7 +10,7 @@
 def determine_amino(amino_counts, threshold):
     amino = ""
     total_count = sum(amino_counts.values())
-    amino_with_max_counts = sorted(amino_counts, key=amino_counts.get, reverse=True)[0]
+    amino_with_max_counts, count = sorted(amino_counts.items(), key=lambda item: item[1], reverse=True)[0]
     if total_count == 0:
         amino = "#"
     elif (amino_counts[amino_with_max_counts] / float(total_count)) > threshold: