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changeset 3:351388dbbc0a draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mash commit 03b0ce2da0b398127862d5d235bed8f9c0b23622-dirty
author dfornika
date Tue, 22 Jan 2019 17:18:46 -0500
parents 74242e18b66a
children 033da434cfaf
files mash_screen.xml
diffstat 1 files changed, 8 insertions(+), 8 deletions(-) [+]
line wrap: on
line diff
--- a/mash_screen.xml	Tue Jan 22 16:52:06 2019 -0500
+++ b/mash_screen.xml	Tue Jan 22 17:18:46 2019 -0500
@@ -14,19 +14,19 @@
              -i $minimum_identity_to_report
              -v $maximum_p_value_to_report
              queries.msh
-	     #if str( $pool.pool_input_selector ) == "paired"
-               '$pool.pool_1' '$pool.pool_2'
+	     #if str( $pool_input.pool_input_selector ) == "paired"
+               '$pool_input.pool_1' '$pool_input.pool_2'
              #end if
-             #if str( $pool.pool_input_selector ) == "paired_collection"
-               '$pool.pool.forward' '$pool.pool.reverse'
+             #if str( $pool_input.pool_input_selector ) == "paired_collection"
+               '$pool_input.pool.forward' '$pool_input.pool.reverse'
              #end if
-             #if str( $pool.pool_input_selector ) == "single"
-               '$pool.pool'
+             #if str( $pool_input.pool_input_selector ) == "single"
+               '$pool_input.pool'
              #end if
              > '$output'
     ]]></command>
     <inputs>
-        <conditional name="pool">
+        <conditional name="pool_input">
 	    <param name="pool_input_selector" type="select" label="Single or Paired-end reads" help="Select between paired and single end data">
 		<option value="paired">Paired</option>
 		<option value="single">Single</option>
@@ -66,7 +66,7 @@
         </test>
         <test>
             <param name="queries" value="NZ_MYON01000010.1.msh"/>
-	    <param name="pool_selector" value="paired"/>
+	    <param name="pool_input_selector" value="paired"/>
             <param name="pool_1" value="ERR024951_seqtk_sample_1000_1.fastq"/>
 	    <param name="pool_2" value="ERR024951_seqtk_sample_1000_2.fastq"/>
             <output name="output" file="mash_screen_NZ_MYON01000010.1_ERR024951_seqtk_sample_1000_1and2.tsv"/>