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author dfornika
date Wed, 05 Feb 2020 00:58:24 +0000
parents abcd73320f34
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abcd73320f34 planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/tools/kma/ commit 53a42565eaad1ef0da3e47329dcc93d8841f780e-dirty
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1 <macros>
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2 <token name="@TOOL_VERSION@">1.2.12</token>
abcd73320f34 planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/tools/kma/ commit 53a42565eaad1ef0da3e47329dcc93d8841f780e-dirty
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3 <token name="@INTYPES@">
abcd73320f34 planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/tools/kma/ commit 53a42565eaad1ef0da3e47329dcc93d8841f780e-dirty
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4 fastq,fastq.gz,fastqsanger,fastqsanger.gz
abcd73320f34 planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/tools/kma/ commit 53a42565eaad1ef0da3e47329dcc93d8841f780e-dirty
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5 </token>
abcd73320f34 planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/tools/kma/ commit 53a42565eaad1ef0da3e47329dcc93d8841f780e-dirty
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6 <xml name="kma_index">
abcd73320f34 planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/tools/kma/ commit 53a42565eaad1ef0da3e47329dcc93d8841f780e-dirty
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7 <param label="Select a KMA index" name="kma_index" type="select">
abcd73320f34 planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/tools/kma/ commit 53a42565eaad1ef0da3e47329dcc93d8841f780e-dirty
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8 <options from_data_table="kma_index">
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9 <validator message="No KMA index available" type="no_options" />
abcd73320f34 planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/tools/kma/ commit 53a42565eaad1ef0da3e47329dcc93d8841f780e-dirty
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10 </options>
abcd73320f34 planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/tools/kma/ commit 53a42565eaad1ef0da3e47329dcc93d8841f780e-dirty
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11 </param>
abcd73320f34 planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/tools/kma/ commit 53a42565eaad1ef0da3e47329dcc93d8841f780e-dirty
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12 </xml>
abcd73320f34 planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/tools/kma/ commit 53a42565eaad1ef0da3e47329dcc93d8841f780e-dirty
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13 <xml name="citations">
abcd73320f34 planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/tools/kma/ commit 53a42565eaad1ef0da3e47329dcc93d8841f780e-dirty
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14 <citations>
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15 <citation type="bibtex">
abcd73320f34 planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/tools/kma/ commit 53a42565eaad1ef0da3e47329dcc93d8841f780e-dirty
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16 @article{clausen2018rapid,
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17 title={Rapid and precise alignment of raw reads against redundant databases with KMA},
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18 author={Clausen, Philip TLC and Aarestrup, Frank M and Lund, Ole},
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19 journal={BMC bioinformatics},
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20 volume={19},
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21 number={1},
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22 pages={307},
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23 year={2018},
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24 publisher={BioMed Central}
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25 }
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26 </citation>
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27 </citations>
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28 </xml>
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29 </macros>