Mercurial > repos > dfornika > kma

diff macros.xml @ 0:abcd73320f34 draft

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planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/tools/kma/ commit 53a42565eaad1ef0da3e47329dcc93d8841f780e-dirty
author dfornika
date Thu, 03 Oct 2019 01:10:37 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/macros.xml	Thu Oct 03 01:10:37 2019 -0400
@@ -0,0 +1,29 @@
+<macros>
+    <token name="@TOOL_VERSION@">1.2.12</token>
+    <token name="@INTYPES@">
+        fastq,fastq.gz,fastqsanger,fastqsanger.gz
+    </token>
+    <xml name="kma_index">
+        <param label="Select a KMA index" name="kma_index" type="select">
+            <options from_data_table="kma_index">
+                <validator message="No KMA index available" type="no_options" />
+            </options>
+        </param>
+    </xml>
+    <xml name="citations">
+        <citations>
+            <citation type="bibtex">
+	    @article{clausen2018rapid,
+                title={Rapid and precise alignment of raw reads against redundant databases with KMA},
+                author={Clausen, Philip TLC and Aarestrup, Frank M and Lund, Ole},
+                journal={BMC bioinformatics},
+                volume={19},
+                number={1},
+                pages={307},
+                year={2018},
+                publisher={BioMed Central}
+            }
+            </citation>
+        </citations>
+    </xml>
+</macros>