Mercurial > repos > dfornika > data_manager_build_kraken2_database

annotate data_manager_conf.xml @ 63:80e778af6c6c draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 57b36cfbdd1663aef43d03b76e37364cc5bdeef3-dirty"
author dfornika
date Wed, 03 Nov 2021 22:34:28 +0000
parents 38c99b294264
children 1381471bb6e5
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b1805f086b66 planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kraken2_database/ commit 9b4d704c147761201fa9f1450fcf5ba6871104d8-dirty
dfornika
parents:
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1 <data_managers>
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80e778af6c6c "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 57b36cfbdd1663aef43d03b76e37364cc5bdeef3-dirty"
dfornika
parents: 62
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2 <data_manager tool_file="data_manager/kraken2_build_database.xml" id="kraken2_build_database" version="2.0.8_beta+galaxy1">
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86bc169b0aeb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 1137710d16538da15bcd87e1ba382e2afc00031f-dirty
dfornika
parents: 32
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3 <data_table name="kraken2_databases">
86bc169b0aeb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 1137710d16538da15bcd87e1ba382e2afc00031f-dirty
dfornika
parents: 32
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4 <output>
86bc169b0aeb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 1137710d16538da15bcd87e1ba382e2afc00031f-dirty
dfornika
parents: 32
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5 <column name="value"/>
86bc169b0aeb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 1137710d16538da15bcd87e1ba382e2afc00031f-dirty
dfornika
parents: 32
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6 <column name="name"/>
86bc169b0aeb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 1137710d16538da15bcd87e1ba382e2afc00031f-dirty
dfornika
parents: 32
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7 <column name="path" output_ref="out_file">
86bc169b0aeb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 1137710d16538da15bcd87e1ba382e2afc00031f-dirty
dfornika
parents: 32
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8 <move type="directory">
86bc169b0aeb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 1137710d16538da15bcd87e1ba382e2afc00031f-dirty
dfornika
parents: 32
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9 <source>${path}</source>
86bc169b0aeb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 1137710d16538da15bcd87e1ba382e2afc00031f-dirty
dfornika
parents: 32
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10 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">kraken2_databases/${path}</target>
86bc169b0aeb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 1137710d16538da15bcd87e1ba382e2afc00031f-dirty
dfornika
parents: 32
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11 </move>
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fd3fd1cae8dd planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kraken2_database/ commit 70494d589aa1990618ebc7a895e91477d41c3203-dirty
dfornika
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12 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/kraken2_databases/${path}</value_translation>
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86bc169b0aeb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 1137710d16538da15bcd87e1ba382e2afc00031f-dirty
dfornika
parents: 32
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13 <value_translation type="function">abspath</value_translation>
86bc169b0aeb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 1137710d16538da15bcd87e1ba382e2afc00031f-dirty
dfornika
parents: 32
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14 </column>
86bc169b0aeb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 1137710d16538da15bcd87e1ba382e2afc00031f-dirty
dfornika
parents: 32
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15 </output>
86bc169b0aeb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 1137710d16538da15bcd87e1ba382e2afc00031f-dirty
dfornika
parents: 32
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16 </data_table>
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7cea257d1e77 planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kraken2_database/ commit 682a16af9bce01ff23176dbce291034d67947e58-dirty
dfornika
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17 </data_manager>
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b1805f086b66 planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kraken2_database/ commit 9b4d704c147761201fa9f1450fcf5ba6871104d8-dirty
dfornika
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18 </data_managers>