<macros>
    <xml name="requirements">
        <requirements>
            <requirement type="package" version="@VERSION@">confindr</requirement>
            <yield />
        </requirements>
    </xml>

    <xml name="version_command">
        <version_command><![CDATA[confindr.py --version]]></version_command>
    </xml>

    <token name="@VERSION@">0.7.2</token>

    <token name="@INTYPES">
        fastq,fastqsanger
    </token>

    <xml name="citations">
        <citations>
            <citation type="bibtex">
                @article{low2019confindr,
                title={ConFindr: rapid detection of intraspecies and cross-species contamination in bacterial whole-genome sequence data},
                author={Low, Andrew J and Koziol, Adam G and Manninger, Paul A and Blais, Burton and Carrillo, Catherine D},
                journal={PeerJ},
                volume={7},
                pages={e6995},
                year={2019},
                publisher={PeerJ Inc.}
                }
            </citation>
        </citations>
    </xml>
</macros>