Mercurial > repos > devteam > vcfcommonsamples
diff vcfcommonsamples.xml @ 1:167d9cf0e88d draft
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfcommonsamples commit 0b9b6512272b82637c2f1e831367e89aed77ae79
| author | devteam |
|---|---|
| date | Thu, 15 Sep 2016 16:03:38 -0400 |
| parents | 1af6f51218b6 |
| children | 976d3b4447cd |
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--- a/vcfcommonsamples.xml Mon Nov 09 12:31:04 2015 -0500 +++ b/vcfcommonsamples.xml Thu Sep 15 16:03:38 2016 -0400 @@ -1,32 +1,32 @@ -<tool id="vcfcommonsamples" name="VCFcommonSamples:" version="0.0.3"> - <description>Output records belonging to samples common between two datasets</description> - <macros> - <import>macros.xml</import> - </macros> - <expand macro="requirements"></expand> - <expand macro="stdio" /> - <command>vcfcommonsamples "${input1}" "${input2}" > "${out_file1}"</command> - <inputs> - <param format="vcf" name="input1" type="data" label="First dataset"/> - <param format="vcf" name="input2" type="data" label="Second dataset"/> - </inputs> - <outputs> - <data format="vcf" name="out_file1" /> - </outputs> - <tests> - <test> - <param name="input1" value="vcflib.vcf"/> - <param name="input2" value="vcfcommonsamples-test1-input2.vcf"/> - <output name="out_file1" file="vcfcommonsamples-test1.vcf"/> - </test> - </tests> - <help> - -Outputs each record in the first file, removing samples not present in the second. - ----- - -Vcfcommonsamples @IS_PART_OF_VCFLIB@ -</help> - <expand macro="citations" /> -</tool> +<tool id="vcfcommonsamples" name="VCFcommonSamples:" version="@WRAPPER_VERSION@.0"> + <description>Output records belonging to samples common between two datasets</description> + <macros> + <import>macros.xml</import> + </macros> + <expand macro="requirements"/> + <expand macro="stdio" /> + <command>vcfcommonsamples "${input1}" "${input2}" > "${out_file1}"</command> + <inputs> + <param format="vcf" name="input1" type="data" label="First dataset"/> + <param format="vcf" name="input2" type="data" label="Second dataset"/> + </inputs> + <outputs> + <data format="vcf" name="out_file1" /> + </outputs> + <tests> + <test> + <param name="input1" value="vcflib.vcf"/> + <param name="input2" value="vcfcommonsamples-test1-input2.vcf"/> + <output name="out_file1" file="vcfcommonsamples-test1.vcf"/> + </test> + </tests> + <help> + +Outputs each record in the first file, removing samples not present in the second. + +---- + +Vcfcommonsamples @IS_PART_OF_VCFLIB@ +</help> + <expand macro="citations" /> +</tool>