Mercurial > repos > devteam > samtools_flagstat

annotate test-data/samtools_flagstat_out1.txt @ 3:480404be9626 draft

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Uploaded version 1.0.3 for samtools 1.1
author devteam
date Fri, 26 Sep 2014 14:35:56 -0400
parents 728e2ed819a1
children 10b658bef71a
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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0
1bbde47ebd2a Uploaded
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1 10 + 0 in total (QC-passed reads + QC-failed reads)
3
480404be9626 Uploaded version 1.0.3 for samtools 1.1
devteam
parents: 2
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2 0 + 0 secondary
480404be9626 Uploaded version 1.0.3 for samtools 1.1
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parents: 2
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3 0 + 0 supplimentary
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1bbde47ebd2a Uploaded
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4 0 + 0 duplicates
2
728e2ed819a1 Uploaded tool version 1.0.2, updated for samtools 1.0.
devteam
parents: 0
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5 10 + 0 mapped (100.00%:-nan%)
0
1bbde47ebd2a Uploaded
devteam
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6 0 + 0 paired in sequencing
1bbde47ebd2a Uploaded
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parents:
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7 0 + 0 read1
1bbde47ebd2a Uploaded
devteam
parents:
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8 0 + 0 read2
2
728e2ed819a1 Uploaded tool version 1.0.2, updated for samtools 1.0.
devteam
parents: 0
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9 0 + 0 properly paired (-nan%:-nan%)
0
1bbde47ebd2a Uploaded
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10 0 + 0 with itself and mate mapped
2
728e2ed819a1 Uploaded tool version 1.0.2, updated for samtools 1.0.
devteam
parents: 0
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11 0 + 0 singletons (-nan%:-nan%)
0
1bbde47ebd2a Uploaded
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12 0 + 0 with mate mapped to a different chr
1bbde47ebd2a Uploaded
devteam
parents:
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13 0 + 0 with mate mapped to a different chr (mapQ>=5)