Mercurial > repos > devteam > data_manager_twobit_builder

diff data_manager/twobit_builder.xml @ 7:94bffa4fdedc draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_twobit_builder commit 18d696a933873372ae5c77257fd31eaf2cd4ed13
author iuc
date Sun, 16 Apr 2023 08:15:04 +0000
parents b640d79b49cb
children 4a7740ee2892
line wrap: on
line diff
--- a/data_manager/twobit_builder.xml	Thu Nov 28 20:33:03 2019 +0000
+++ b/data_manager/twobit_builder.xml	Sun Apr 16 08:15:04 2023 +0000
@@ -1,4 +1,4 @@
-<tool id="twobit_builder_data_manager" name="TwoBit" tool_type="manage_data" version="0.0.4" profile="19.05">
+<tool id="twobit_builder_data_manager" name="TwoBit" tool_type="manage_data" version="0.0.5" profile="19.05">
     <requirements>
         <requirement type="package" version="377">ucsc-fatotwobit</requirement>
         <requirement type="package" version="3.7">python</requirement>
@@ -7,6 +7,7 @@
     <command detect_errors="exit_code"><![CDATA[
 python '$__tool_directory__/twobit_builder.py'
 '${out_file}'
+$long
 --fasta_filename '${all_fasta_source.fields.path}'
 --fasta_dbkey '${all_fasta_source.fields.dbkey}'
 --fasta_description '${all_fasta_source.fields.name}'
@@ -17,6 +18,7 @@
         </param>
         <param name="sequence_name" type="text" value="" label="Name of sequence" />
         <param name="sequence_id" type="text" value="" label="ID for sequence" />
+        <param argument="--long" type="boolean" truevalue="--long" falsevalue="" label="Use the -long option for very big genomes." />
     </inputs>
     <outputs>
         <data name="out_file" format="data_manager_json"/>