Mercurial > repos > dcorreia > phylogeny_tools

changeset 13:ebacad7a8859 draft

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Uploaded
author dcorreia
date Fri, 22 Apr 2016 10:18:46 -0400
parents 8e4d8265948f
children dbc0ef004df0
files workflows/Oneclick_FastME_workflow.ga
diffstat 1 files changed, 26 insertions(+), 34 deletions(-) [+]
line wrap: on
line diff
--- a/workflows/Oneclick_FastME_workflow.ga	Fri Apr 22 08:32:30 2016 -0400
+++ b/workflows/Oneclick_FastME_workflow.ga	Fri Apr 22 10:18:46 2016 -0400
@@ -20,7 +20,7 @@
             "outputs": [], 
             "position": {
                 "left": 205.5, 
-                "top": 257.5
+                "top": 318.5
             }, 
             "tool_errors": null, 
             "tool_id": null, 
@@ -60,8 +60,8 @@
                 }
             ], 
             "position": {
-                "left": 451, 
-                "top": 135
+                "left": 420, 
+                "top": 200
             }, 
             "post_job_actions": {}, 
             "tool_errors": null, 
@@ -85,7 +85,7 @@
         }, 
         "2": {
             "annotation": "", 
-            "content_id": "testtoolshed.g2.bx.psu.edu/repos/dcorreia/dna_or_protein/AutoDetect-1.0/1.0", 
+            "content_id": "testtoolshed.g2.bx.psu.edu/repos/dcorreia/phylogeny_tools/seqtypedetect/1.0", 
             "id": 2, 
             "input_connections": {
                 "input": {
@@ -95,7 +95,7 @@
             }, 
             "inputs": [], 
             "label": null, 
-            "name": "Automatic Detection", 
+            "name": "Sequence type detection", 
             "outputs": [
                 {
                     "name": "output", 
@@ -103,8 +103,8 @@
                 }
             ], 
             "position": {
-                "left": 457, 
-                "top": 379
+                "left": 424.5, 
+                "top": 427.5
             }, 
             "post_job_actions": {
                 "HideDatasetActionoutput": {
@@ -114,11 +114,11 @@
                 }
             }, 
             "tool_errors": null, 
-            "tool_id": "testtoolshed.g2.bx.psu.edu/repos/dcorreia/dna_or_protein/AutoDetect-1.0/1.0", 
+            "tool_id": "testtoolshed.g2.bx.psu.edu/repos/dcorreia/phylogeny_tools/seqtypedetect/1.0", 
             "tool_state": "{\"input\": \"null\", \"__rerun_remap_job_id__\": null, \"__page__\": 0}", 
             "tool_version": "1.0", 
             "type": "tool", 
-            "uuid": "e8a10056-54c3-4d63-93aa-a7a3b1cb2382", 
+            "uuid": "4e5b5fa3-4f80-4dcf-b9ce-fd607b1fdb7f", 
             "workflow_outputs": []
         }, 
         "3": {
@@ -154,7 +154,7 @@
             ], 
             "position": {
                 "left": 775, 
-                "top": 163
+                "top": 224
             }, 
             "post_job_actions": {
                 "HideDatasetActionoutput2": {
@@ -184,7 +184,7 @@
         }, 
         "4": {
             "annotation": "", 
-            "content_id": "testtoolshed.g2.bx.psu.edu/repos/mish/fasta_to_phylip/abims_fasta_to_phylip/2.0.0", 
+            "content_id": "testtoolshed.g2.bx.psu.edu/repos/dcorreia/phylogeny_tools/fasta_to_phylip/1.0.0", 
             "id": 4, 
             "input_connections": {
                 "input": {
@@ -194,39 +194,31 @@
             }, 
             "inputs": [], 
             "label": null, 
-            "name": "Fasta_to_Phylip", 
+            "name": "Fasta to Phylip", 
             "outputs": [
                 {
                     "name": "output", 
-                    "type": "phy"
+                    "type": "phylip"
                 }
             ], 
             "position": {
-                "left": 781.9166870117188, 
-                "top": 339.91668701171875
+                "left": 784, 
+                "top": 413.5
             }, 
             "post_job_actions": {
-                "ChangeDatatypeActionoutput": {
-                    "action_arguments": {
-                        "newtype": "phylip"
-                    }, 
-                    "action_type": "ChangeDatatypeAction", 
+                "HideDatasetActionoutput": {
+                    "action_arguments": {}, 
+                    "action_type": "HideDatasetAction", 
                     "output_name": "output"
                 }
             }, 
             "tool_errors": null, 
-            "tool_id": "testtoolshed.g2.bx.psu.edu/repos/mish/fasta_to_phylip/abims_fasta_to_phylip/2.0.0", 
-            "tool_state": "{\"input\": \"null\", \"__rerun_remap_job_id__\": null, \"__page__\": 0}", 
-            "tool_version": "2.0.0", 
+            "tool_id": "testtoolshed.g2.bx.psu.edu/repos/dcorreia/phylogeny_tools/fasta_to_phylip/1.0.0", 
+            "tool_state": "{\"__page__\": 0, \"input\": \"null\", \"__rerun_remap_job_id__\": null, \"format\": \"\\\"\\\"\"}", 
+            "tool_version": "1.0.0", 
             "type": "tool", 
-            "uuid": "bf9ed622-9101-422f-afb8-5666ced5be97", 
-            "workflow_outputs": [
-                {
-                    "label": null, 
-                    "output_name": "output", 
-                    "uuid": "512c3b39-a145-496b-ad18-2e2e931361e7"
-                }
-            ]
+            "uuid": "e47321fd-5d3e-4386-8c1e-8c0b0692c924", 
+            "workflow_outputs": []
         }, 
         "5": {
             "annotation": "", 
@@ -265,7 +257,7 @@
             ], 
             "position": {
                 "left": 784.9166870117188, 
-                "top": 477.91668701171875
+                "top": 538.9166870117188
             }, 
             "post_job_actions": {
                 "ChangeDatatypeActionoutputTree": {
@@ -326,7 +318,7 @@
             ], 
             "position": {
                 "left": 1043, 
-                "top": 325
+                "top": 386
             }, 
             "post_job_actions": {}, 
             "tool_errors": null, 
@@ -344,5 +336,5 @@
             ]
         }
     }, 
-    "uuid": "8a30023b-e3d7-4272-b8bb-807370fd7ec6"
+    "uuid": "17a16b44-5977-4861-b46d-d04f4e2e5876"
 }
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