Mercurial > repos > dcorreia > package_phyml_sms_1_7
annotate tool_dependencies.xml @ 0:f7b03e9db640 draft default tip
planemo upload commit e0ca504b3313992020acf8ab7aed0a261237766e-dirty
| author | dcorreia |
|---|---|
| date | Tue, 31 Jan 2017 10:47:55 -0500 |
| parents | |
| children |
| rev | line source |
|---|---|
|
0
f7b03e9db640
planemo upload commit e0ca504b3313992020acf8ab7aed0a261237766e-dirty
dcorreia
parents:
diff
changeset
|
1 <?xml version="1.0"?> |
|
f7b03e9db640
planemo upload commit e0ca504b3313992020acf8ab7aed0a261237766e-dirty
dcorreia
parents:
diff
changeset
|
2 <tool_dependency> |
|
f7b03e9db640
planemo upload commit e0ca504b3313992020acf8ab7aed0a261237766e-dirty
dcorreia
parents:
diff
changeset
|
3 <package name="phyml-sms" version="1.7"> |
|
f7b03e9db640
planemo upload commit e0ca504b3313992020acf8ab7aed0a261237766e-dirty
dcorreia
parents:
diff
changeset
|
4 <install version="1.0"> |
|
f7b03e9db640
planemo upload commit e0ca504b3313992020acf8ab7aed0a261237766e-dirty
dcorreia
parents:
diff
changeset
|
5 <actions> |
|
f7b03e9db640
planemo upload commit e0ca504b3313992020acf8ab7aed0a261237766e-dirty
dcorreia
parents:
diff
changeset
|
6 <action type="download_by_url">http://www.atgc-montpellier.fr/download/sources/sms/sms-1.7.zip</action> |
|
f7b03e9db640
planemo upload commit e0ca504b3313992020acf8ab7aed0a261237766e-dirty
dcorreia
parents:
diff
changeset
|
7 <action type="shell_command">make</action> |
|
f7b03e9db640
planemo upload commit e0ca504b3313992020acf8ab7aed0a261237766e-dirty
dcorreia
parents:
diff
changeset
|
8 <action type="chmod"><file mode="755">$INSTALL_DIR/sms.sh</file></action> |
|
f7b03e9db640
planemo upload commit e0ca504b3313992020acf8ab7aed0a261237766e-dirty
dcorreia
parents:
diff
changeset
|
9 <action type="chmod"><file mode="755">$INSTALL_DIR/phyml-src/phyml</file></action> |
|
f7b03e9db640
planemo upload commit e0ca504b3313992020acf8ab7aed0a261237766e-dirty
dcorreia
parents:
diff
changeset
|
10 <action type="move_directory_files"> |
|
f7b03e9db640
planemo upload commit e0ca504b3313992020acf8ab7aed0a261237766e-dirty
dcorreia
parents:
diff
changeset
|
11 <source_directory>$TMP_WORK_DIR/sms-1.7</source_directory> |
|
f7b03e9db640
planemo upload commit e0ca504b3313992020acf8ab7aed0a261237766e-dirty
dcorreia
parents:
diff
changeset
|
12 <destination_directory>$INSTALL_DIR/sources</destination_directory> |
|
f7b03e9db640
planemo upload commit e0ca504b3313992020acf8ab7aed0a261237766e-dirty
dcorreia
parents:
diff
changeset
|
13 </action> |
|
f7b03e9db640
planemo upload commit e0ca504b3313992020acf8ab7aed0a261237766e-dirty
dcorreia
parents:
diff
changeset
|
14 <action type="set_environment"> |
|
f7b03e9db640
planemo upload commit e0ca504b3313992020acf8ab7aed0a261237766e-dirty
dcorreia
parents:
diff
changeset
|
15 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/sources</environment_variable> |
|
f7b03e9db640
planemo upload commit e0ca504b3313992020acf8ab7aed0a261237766e-dirty
dcorreia
parents:
diff
changeset
|
16 </action> |
|
f7b03e9db640
planemo upload commit e0ca504b3313992020acf8ab7aed0a261237766e-dirty
dcorreia
parents:
diff
changeset
|
17 </actions> |
|
f7b03e9db640
planemo upload commit e0ca504b3313992020acf8ab7aed0a261237766e-dirty
dcorreia
parents:
diff
changeset
|
18 </install> |
|
f7b03e9db640
planemo upload commit e0ca504b3313992020acf8ab7aed0a261237766e-dirty
dcorreia
parents:
diff
changeset
|
19 </package> |
|
f7b03e9db640
planemo upload commit e0ca504b3313992020acf8ab7aed0a261237766e-dirty
dcorreia
parents:
diff
changeset
|
20 </tool_dependency> |
