Mercurial > repos > dcorreia > bmge

changeset 10:c348ec5aebcc draft

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Uploaded
author dcorreia
date Wed, 21 Dec 2016 07:54:36 -0500
parents fa9a0f15a67e
children a943abb980db
files BMGE.xml
diffstat 1 files changed, 5 insertions(+), 5 deletions(-) [+]
line wrap: on
line diff
--- a/BMGE.xml	Wed Dec 21 07:50:44 2016 -0500
+++ b/BMGE.xml	Wed Dec 21 07:54:36 2016 -0500
@@ -15,7 +15,7 @@
                     -b $minBlock
                     #for $output in $outputFormat.value
                         #if $output
-                            -$output ${output$output}
+                            -$output file$output
                         #end if
                     #end for
 	</command>
@@ -87,16 +87,16 @@
     </param>			
 	</inputs>
 	<outputs>
-		<data name="outputop" format="phylip" label="BMGE Cleaned sequences Phylip">
+		<data name="outputop" format="phylip" label="BMGE Cleaned sequences Phylip" from_work_dir="fileop">
 			<filter>'op' in outputFormat</filter>
 		</data>
-		<data name="outputof" format="Fasta" label="BMGE Cleaned sequences Fasta">
+		<data name="outputof" format="Fasta" label="BMGE Cleaned sequences Fasta"  from_work_dir="fileof">
 			<filter>'of' in outputFormat</filter>
 		</data>
-		<data name="outputon" format="Nexus" label="BMGE Cleaned sequences Nexus">
+		<data name="outputon" format="Nexus" label="BMGE Cleaned sequences Nexus" from_work_dir="fileon">
 			<filter>'on' in outputFormat</filter>
 		</data>
-		<data name="outputoh" format="html" label="BMGE Cleaned sequences Html">
+		<data name="outputoh" format="html" label="BMGE Cleaned sequences Html" from_work_dir="fileoh">
 			<filter>'oh' in outputFormat</filter>
 		</data>
 	</outputs>