view germline/TRGV.fa @ 7:e55dfd9a8c00 draft default tip

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author davidvanzessen
date Thu, 12 Feb 2015 10:47:15 -0500
parents fe4001bdf8d4
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>M12949|TRGV1*01|Homo sapiens|ORF|V-REGION|174..470|297 nt|1| | | | |297+0=297| |rev-compl|
tcttccaacttggaagggagaacgaagtcagtcaccaggctgactgggtcatctgctgaa
atcacctgtgatcttcctggagcaagtaccttatacatccactggtacctgcaccaggag
gggaaggccccacagtgtcttctgtactatgaaccctactactccagggttgtgctggaa
tcaggaatcactccaggaaagtatgacactggaagcacaaggagcaattggaatttgaga
ctgcaaaatctaattaaaaatgattctgggttctattactgtgccacctgggacagg
>X07206|TRGV10*01|Homo sapiens|ORF|V-REGION|164..474|311 nt|1| | | | |311+0=311| |rev-compl|
ttatcaaaagtggagcagttccagctatccatttccacggaagtcaagaaaagtattgac
ataccttgcaagatatcgagcacaaggtttgaaacagatgtcattcactggtaccggcag
aaaccaaatcaggctttggagcacctgatctatattgtctcaacaaaatccgcagctcga
cgcagcatgggtaagacaagcaacaaagtggaggcaagaaagaattctcaaactctcact
tcaatccttaccatcaagtccgtagagaaagaagacatggccgtttactactgtgctgcg
tggtgggtggc
>X74798|TRGV10*02|Homo sapiens|ORF|V-REGION|164..471|308 nt|1| | | | |308+0=308| |rev-compl|
ttatcaaaagtggagcagttccagctatccatttccacggaagtcaagaaaagtattgac
ataccttgcaagatatcgagcacaaggtttgaaacagatgtcattcactggtaccggcag
aaaccaaatcaggctttggagcacctgatctatattgtctcaacaaaatccgcagctcga
cgcagcatgggtaagacaagcaacaaagtggaggcaagaaagaattctcaaactctcact
tcaatccttaccatcaagtccgtagagaaagaagacatggccgtttactactgtgctgcg
tgggatta
>Y11227|TRGV11*01|Homo sapiens|ORF|V-REGION|155..463|309 nt|1| | | | |309+0=309| |rev-compl|
cttgggcagttggaacaacctgaaatatctatttccagaccagcaaataagagtgcccac
atatcttggaaggcatccatccaaggctttagcagtaaaatcatacactggtactggcag
aaaccaaacaaaggcttagaatatttattacatgtcttcttgacaatctctgctcaagat
tgctcaggtgggaagactaagaaacttgaggtaagtaaaaatgctcacacttccacttcc
actttgaaaataaagttcttagagaaagaagatgaggtggtgtaccactgtgcctgctgg
attaggcac
>AF159056|TRGV11*02|Homo sapiens|ORF|V-REGION|81990..82298|309 nt|1| | | | |309+0=309| |rev-compl|
cttgggcagttggaacaacctgaaatatctatttccagaccagcaaataagagtgcccac
atatcttggaaggcatccatccaaggctttagcagtaaaatcatacactggtactggcag
aaaccaaacaaaggcttagaatatttattacatgtcttcttgacaatctctgctcaagat
tgctcaggtgggaagactaagaaacttgagataagtaaaaatgctcacacttccacttcc
actttgaaaataaagttcttagagaaagaagatgaggtggtgtaccactgtgcctgctgg
attaggcac
>M13429|TRGV2*01|Homo sapiens|F|V-REGION|166..465|300 nt|1| | | | |300+0=300| |rev-compl|
tcttccaacttggaagggagaacgaagtcagtcatcaggcagactgggtcatctgctgaa
atcacttgtgatcttgctgaaggaagtaacggctacatccactggtacctacaccaggag
gggaaggccccacagcgtcttcagtactatgactcctacaactccaaggttgtgttggaa
tcaggagtcagtccagggaagtattatacttacgcaagcacaaggaacaacttgagattg
atactgcgaaatctaattgaaaatgactctggggtctattactgtgccacctgggacggg
>M27337|TRGV2*02|Homo sapiens|(F)|V-REGION|44..340|297 nt|1| | | | |297+0=297| |rev-compl|
tcttccaacttggaagggagaacgaagtcagtcatcaggcagactgggtcatctgctgaa
atcacttgtgatcttgctgaaggaagtaacggctacatccactggtacctacaccaggag
gggaaggccccacagcgtcttcagtactatgactcctacaactccaaggttgtgttggaa
tcaggagtcagtccagggaagtattatacttacgcaagcacaaggaacaacttgagattg
atactgcaaaatctaattgaaaatgactctggggtctattactgtgccacctgggac
>M13430|TRGV3*01|Homo sapiens|F|V-REGION|169..468|300 nt|1| | | | |300+0=300| |rev-compl|
tcttccaacttggaagggagaacgaagtcagtcaccaggcagactgggtcatctgctgaa
atcacttgcgatcttactgtaacaaataccttctacatccactggtacctacaccaggag
gggaaggccccacagcgtcttctgtactatgacgtctccaccgcaagggatgtgttggaa
tcaggactcagtccaggaaagtattatactcatacacccaggaggtggagctggatattg
agactgcaaaatctaattgaaaatgattctggggtctattactgtgccacctgggacagg
>X04038|TRGV3*02|Homo sapiens|F|V-REGION|339..637|299 nt|1| | | | |299+0=299| |rev-compl|
tcttccaacttggaagggagaacgaagtcagtcaccaggcagactgggtcatctgctgaa
atcacttgcgatcttactgtaacaaataccttctacatccactggtacctacaccaggag
gggaaggccccacagcgtcttctgtactatgacgtctccactgcaagggatgtgttggaa
tcaggactcagtccaggaaagtattatactcatacacccaggaggtggagctggatattg
agactgcaaaatctaattgaaaatgattctggggtctattactgtgccacctgggacag
>X15272|TRGV4*01|Homo sapiens|F|V-REGION|406..705|300 nt|1| | | | |300+0=300| |rev-compl|
tcttccaacttggaagggagaacgaagtcagtcatcaggcagactgggtcatctgctgaa
atcacttgtgatcttgctgaaggaagtaccggctacatccactggtacctacaccaggag
gggaaggccccacagcgtcttctgtactatgactcctacacctccagcgttgtgttggaa
tcaggaatcagcccagggaagtatgatacttatggaagcacaaggaagaacttgagaatg
atactgcgaaatcttattgaaaatgactctggagtctattactgtgccacctgggatggg
>X13354|TRGV4*02|Homo sapiens|F|V-REGION|170..469|300 nt|1| | | | |300+0=300| |rev-compl|
tcttccaacttggaagggagaacgaagtcagtcatcaggcagactgggtcatctgctgaa
atcacttgtgatcttgctgaaggaagtaccggctacatccactggtacctacaccaggag
gggaaggccccacagcgtcttctgtactatgactcctacacctccagcgttgtgttggaa
tcaggaatcagcccagggaagtatgatacttacggaagcacaaggaagaacttgagaatg
atactgcgaaatcttattgaaaatgactctggagtctattactgtgccacctgggatggg
>X13355|TRGV5*01|Homo sapiens|F|V-REGION|171..470|300 nt|1| | | | |300+0=300| |rev-compl|
tcttccaacttggaagggggaacgaagtcagtcacgaggccgactaggtcatctgctgaa
atcacttgtgaccttactgtaataaatgccttctacatccactggtacctacaccaggag
gggaaggccccacagcgtcttctgtactatgacgtctccaactcaaaggatgtgttggaa
tcaggactcagtccaggaaagtattatactcatacacccaggaggtggagctggatattg
atactacgaaatctaattgaaaatgattctggggtctattactgtgccacctgggacagg
>M13431|TRGV5P*01|Homo sapiens|P|V-REGION|171..470|300 nt|1| | | | |300+0=300| |rev-compl|
tcttccaacttggaagggagaatgaagtcagtcaccaggccgactgggtcatctgctgaa
atcacttgtgaccttactgtaataaatgccgtctacatccactggtacctacagcaggag
gggaagaccccacagcatcttctgcactatgaagtctccaactcaagggatgtgttggaa
tcaggtctcagtcttggaaagtattatactcatacaccgaggaggtggagctggaatttg
agactgcaaaatctaattgaaaatgattctggggtctattactgtgccacctggggcagg
>AF159056|TRGV5P*02|Homo sapiens|P|V-REGION|28623..28922|300 nt|1| | | | |300+0=300| |rev-compl|
tcttccaacttggaagggagaatgaagtcagtcaccaggccgactgggtcatctgctgaa
atcacttgtgaccttactgtaataaatgccgtctacatccactggtacctacagcaggag
gggaagaccccacagcatcttctgcactatgatgtctccaactcaagggatgtgttggaa
tcaggtctcagtcttggaaagtattatactcatacaccgaggaggtggagctggaatttg
agactgcaaaatctaattgaaaatgattctggggtctattactgtgccacctggggcagg
>M13434|TRGV8*01|Homo sapiens|F|V-REGION|180..479|300 nt|1| | | | |300+0=300| |rev-compl|
tcttccaacttggaagggagaacaaagtcagtcaccaggccaactgggtcatcagctgta
atcacttgtgatcttcctgtagaaaatgccgtctacacccactggtacctacaccaggag
gggaaggccccacagcgtcttctgtactatgactcctacaactccagggttgtgttggaa
tcaggaatcagtcgagaaaagtatcatacttatgcaagcacagggaagagccttaaattt
atactggaaaatctaattgaacgtgactctggggtctattactgtgccacctgggatagg
>X07205|TRGV9*01|Homo sapiens|F|V-REGION|178..483|306 nt|1| | | | |306+0=306| |rev-compl|
gcaggtcacctagagcaacctcaaatttccagtactaaaacgctgtcaaaaacagcccgc
ctggaatgtgtggtgtctggaataacaatttctgcaacatctgtatattggtatcgagag
agacctggtgaagtcatacagttcctggtgtccatttcatatgacggcactgtcagaaag
gaatccggcattccgtcaggcaaatttgaggtggataggatacctgaaacgtctacatcc
actctcaccattcacaatgtagagaaacaggacatagctacctactactgtgccttgtgg
gaggtg
>X15274|TRGV9*02|Homo sapiens|F|V-REGION|827..1132|306 nt|1| | | | |306+0=306| |rev-compl|
gcaggtcacctagagcaacctcaaatttccagtactaaaacgctgtcaaaaacagcccgc
ctggaatgtgtggtgtctggaataaaaatttctgcaacatctgtatattggtatcgagag
agacctggtgaagtcatacagttcctggtgtccatttcatatgacggcactgtcagaaag
gaatctggcattccgtcaggcaaatttgaggtggataggatacctgaaacgtctacatcc
actctcaccattcacaatgtagagaaacaggacatagctacctactactgtgccttgtgg
gaggtg
>X07208|TRGVA*01|Homo sapiens|P|V-REGION|134..418|285 nt|1| | | | |285+0=285| |rev-compl|
ctcatcaggccggagcagctggcccatgtcctggggcactagggaagcttggtcatcctg
cagtgcgtggtccgcaccaggatcagctacacccactggtaccagcagaagggccaggtc
cctgaggcactccaccagctggccatgtccaagttggatgtgcagtgggattccatcctg
aaagcagataaaatcatagccaaggatggcagcagctctatcttggcagtactgaagttg
gagacaggcatcgagggcatgaactactgcacaacctgggccctg