view germline/TRAJ.fa @ 7:e55dfd9a8c00 draft default tip

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author davidvanzessen
date Thu, 12 Feb 2015 10:47:15 -0500
parents fe4001bdf8d4
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>X02884|TRAJ1*01|Homo sapiens|ORF|J-REGION|2363..2424|62 nt|2| | | | |62+0=62| |rev-compl|
gtatgaaagtattacctcccagttgcaatttggcaaaggaaccagagtttccacttctcc
cc
>M94081|TRAJ10*01|Homo sapiens|F|J-REGION|73699..73762|64 nt|1| | | | |64+0=64| |rev-compl|
atactcacgggaggaggaaacaaactcacctttgggacaggcactcagctaaaagtggaa
ctca
>M94081|TRAJ11*01|Homo sapiens|F|J-REGION|72706..72765|60 nt|3| | | | |60+0=60| |rev-compl|
tgaattcaggatacagcaccctcacctttgggaaggggactatgcttctagtctctccag
>X02885|TRAJ12*01|Homo sapiens|F|J-REGION|53..112|60 nt|3| | | | |60+0=60| |rev-compl|
ggatggatagcagctataaattgatcttcgggagtgggaccagactgctggtcaggcctg
>M94081|TRAJ13*01|Homo sapiens|F|J-REGION|71280..71342|63 nt|3| | | | |63+0=63| |rev-compl|
tgaattctgggggttaccagaaagttacctttggaattggaacaaagctccaagtcatcc
caa
>AC023226|TRAJ13*02|Homo sapiens|F|J-REGION|51292..51354|63 nt|3| | | | |63+0=63| | |
tgaattctgggggttaccagaaagttacctttggaactggaacaaagctccaagtcatcc
caa
>M94081|TRAJ14*01|Homo sapiens|F|J-REGION|70532..70583|52 nt|1| | | | |52+0=52| |rev-compl|
atttatagcacattcatctttgggagtgggacaagattatcagtaaaacctg
>X05775|TRAJ15*01|Homo sapiens|F|J-REGION|80..139|60 nt|3| | | | |60+0=60| |rev-compl|
ccaaccaggcaggaactgctctgatctttgggaagggaaccaccttatcagtgagttcca
>M94081|TRAJ15*02|Homo sapiens|F|J-REGION|69836..69895|60 nt|3| | | | |60+0=60| |rev-compl|
ccaaccaggcaggaactgctctgatctttgggaagggaacccacctatcagtgagttcca
>M94081|TRAJ16*01|Homo sapiens|F|J-REGION|68743..68802|60 nt|3| | | | |60+0=60| |rev-compl|
ggttttcagatggccagaagctgctctttgcaaggggaaccatgttaaaggtggatctta
>X05773|TRAJ17*01|Homo sapiens|F|J-REGION|173..235|63 nt|3| | | | |63+0=63| |rev-compl|
tgatcaaagctgcaggcaacaagctaacttttggaggaggaaccagggtgctagttaaac
caa
>M94081|TRAJ18*01|Homo sapiens|F|J-REGION|65876..65941|66 nt|3| | | | |66+0=66| |rev-compl|
ccgacagaggctcaaccctggggaggctatactttggaagaggaactcagttgactgtct
ggcctg
>M94081|TRAJ19*01|Homo sapiens|ORF|J-REGION|65489..65548|60 nt|3| | | | |60+0=60| |rev-compl|
gctatcaaagattttacaatttcacctttggaaagggatccaaacataatgtcactccaa
>X02884|TRAJ2*01|Homo sapiens|ORF|J-REGION|1397..1462|66 nt|3| | | | |66+0=66| |rev-compl|
tgaatactggaggaacaattgataaactcacatttgggaaagggacccatgtattcatta
tatctg
>M94081|TRAJ20*01|Homo sapiens|F|J-REGION|64552..64608|57 nt|3| | | | |57+0=57| |rev-compl|
gttctaacgactacaagctcagctttggagccggaaccacagtaactgtaagagcaa
>M94081|TRAJ21*01|Homo sapiens|F|J-REGION|63829..63883|55 nt|1| | | | |55+0=55| |rev-compl|
tacaacttcaacaaattttactttggatctgggaccaaactcaatgtaaaaccaa
>X02886|TRAJ22*01|Homo sapiens|F|J-REGION|405..467|63 nt|3| | | | |63+0=63| |rev-compl|
tttcttctggttctgcaaggcaactgacctttggatctgggacacaattgactgttttac
ctg
>M94081|TRAJ23*01|Homo sapiens|F|J-REGION|60650..60712|63 nt|3| | | | |63+0=63| |rev-compl|
tgatttataaccagggaggaaagcttatcttcggacagggaacggagttatctgtgaaac
cca
>X58763|TRAJ23*02|Homo sapiens|(F)|J-REGION|61..123|63 nt|3| | | | |63+0=63| |rev-compl|
tgatttataaccagggaggaaagcttatcttcggacagggaacggagctatctgtgaaac
cca
>X02887|TRAJ24*01|Homo sapiens|F|J-REGION|124..186|63 nt|3| | | | |63+0=63| |rev-compl|
tgacaactgacagctgggggaaattcgagtttggagcagggacccaggttgtggtcaccc
cag
>M94081|TRAJ24*02|Homo sapiens|F|J-REGION|60203..60265|63 nt|3| | | | |63+0=63| |rev-compl|
tgacaactgacagctgggggaaattgcagtttggagcagggacccaggttgtggtcaccc
cag
>X02888|TRAJ25*01|Homo sapiens|ORF|J-REGION|35..94|60 nt|3| | | | |60+0=60| |rev-compl|
cagaaggacaaggcttctcctttatctttgggaaggggacaaggctgcttgtcaagccaa
>M94081|TRAJ26*01|Homo sapiens|F|J-REGION|58680..58739|60 nt|3| | | | |60+0=60| |rev-compl|
gggataactatggtcagaattttgtctttggtcccggaaccagattgtccgtgctgccct
>M94081|TRAJ27*01|Homo sapiens|F|J-REGION|56507..56565|59 nt|2| | | | |59+0=59| |rev-compl|
taacaccaatgcaggcaaatcaacctttggggatgggactacgctcactgtgaagccaa
>M94081|TRAJ28*01|Homo sapiens|F|J-REGION|55857..55922|66 nt|3| | | | |66+0=66| |rev-compl|
catactctggggctgggagttaccaactcactttcgggaaggggaccaaactctcggtca
taccaa
>M94081|TRAJ29*01|Homo sapiens|F|J-REGION|54177..54236|60 nt|3| | | | |60+0=60| |rev-compl|
ggaattcaggaaacacacctcttgtctttggaaagggcacaagactttctgtgattgcaa
>X02884|TRAJ3*01|Homo sapiens|F|J-REGION|504..565|62 nt|2| | | | |62+0=62| |rev-compl|
ggggtacagcagtgcttccaagataatctttggatcagggaccagactcagcatccggcc
aa
>M94081|TRAJ30*01|Homo sapiens|F|J-REGION|53090..53146|57 nt|3| | | | |57+0=57| |rev-compl|
tgaacagagatgacaagatcatctttggaaaagggacacgacttcatattctcccca
>M14905|TRAJ31*01|Homo sapiens|F|J-REGION|77..132|56 nt|2| | | | |56+0=56| |rev-compl|
gaataacaatgccagactcatgtttggagatggaactcagctggtggtgaagccca
>M94081|TRAJ32*01|Homo sapiens|F|J-REGION|49581..49646|66 nt|3| | | | |66+0=66| |rev-compl|
tgaattatggcggtgctacaaacaagctcatctttggaactggcactctgcttgctgtcc
agccaa
>AF532854|TRAJ32*02|Homo sapiens|(F)|J-REGION|240..299|60 nt|3| |1| | |60+0=60|partial in 5'|rev-compl|
atggtggtgctacaaacaagctcatctttggaactggcactctgcttgctgtccagccaa
>M94081|TRAJ33*01|Homo sapiens|F|J-REGION|48843..48899|57 nt|3| | | | |57+0=57| |rev-compl|
tggatagcaactatcagttaatctggggcgctgggaccaagctaattataaagccag
>M35622|TRAJ34*01|Homo sapiens|F|J-REGION|30..87|58 nt|1| | | | |58+0=58| |rev-compl|
tcttataacaccgacaagctcatctttgggactgggaccagattacaagtctttccaa
>M94081|TRAJ35*01|Homo sapiens|ORF|J-REGION|46885..46943|59 nt|2| | | | |59+0=59| |rev-compl|
gataggctttgggaatgtgctgcattgcgggtccggcactcaagtgattgttttaccac
>M94081|TRAJ36*01|Homo sapiens|F|J-REGION|45353..45411|59 nt|2| | | | |59+0=59| |rev-compl|
tcaaactggggcaaacaacctcttctttgggactggaacgagactcaccgttattccct
>M94081|TRAJ37*01|Homo sapiens|F|J-REGION|43993..44054|62 nt|2| | | | |62+0=62| |rev-compl|
tggctctggcaacacaggcaaactaatctttgggcaagggacaactttacaagtaaaacc
ag
>AJ007774|TRAJ37*02|Homo sapiens|(F)|J-REGION|336..397|62 nt|2| |1| | |62+0=62| |rev-compl|
tggctctagcaacacaggcaaactaatctttgggcaagggacaactttacaagtaaaacc
ag
>M94081|TRAJ38*01|Homo sapiens|F|J-REGION|42473..42534|62 nt|2| | | | |62+0=62| |rev-compl|
taatgctggcaacaaccgtaagctgatttggggattgggaacaagcctggcagtaaatcc
ga
>M94081|TRAJ39*01|Homo sapiens|F|J-REGION|41843..41905|63 nt|3| | | | |63+0=63| |rev-compl|
tgaataataatgcaggcaacatgctcacctttggagggggaacaaggttaatggtcaaac
ccc
>M94081|TRAJ4*01|Homo sapiens|F|J-REGION|82396..82458|63 nt|3| | | | |63+0=63| |rev-compl|
tgttttctggtggctacaataagctgatttttggagcagggaccaggctggctgtacacc
cat
>M35620|TRAJ40*01|Homo sapiens|F|J-REGION|35..95|61 nt|1| | | | |61+0=61| |rev-compl|
actacctcaggaacctacaaatacatctttggaacaggcaccaggctgaaggttttagca
a
>M94081|TRAJ41*01|Homo sapiens|F|J-REGION|37900..37961|62 nt|2| | | | |62+0=62| |rev-compl|
gaactcaaattccgggtatgcactcaacttcggcaaaggcacctcgctgttggtcacacc
cc
>M94081|TRAJ42*01|Homo sapiens|F|J-REGION|37130..37195|66 nt|3| | | | |66+0=66| |rev-compl|
tgaattatggaggaagccaaggaaatctcatctttggaaaaggcactaaactctctgtta
aaccaa
>M94081|TRAJ43*01|Homo sapiens|F|J-REGION|36154..36207|54 nt|3| | | | |54+0=54| |rev-compl|
acaataacaatgacatgcgctttggagcagggaccagactgacagtaaaaccaa
>M35619|TRAJ44*01|Homo sapiens|F|J-REGION|30..92|63 nt|3| | | | |63+0=63| |rev-compl|
taaataccggcactgccagtaaactcacctttgggactggaacaagacttcaggtcacgc
tcg
>M94081|TRAJ45*01|Homo sapiens|F|J-REGION|34169..34234|66 nt|3| | | | |66+0=66| |rev-compl|
tgtattcaggaggaggtgctgacggactcacctttggcaaagggactcatctaatcatcc
agccct
>M94081|TRAJ46*01|Homo sapiens|F|J-REGION|33647..33709|63 nt|3| | | | |63+0=63| |rev-compl|
agaagaaaagcagcggagacaagctgacttttgggaccgggactcgtttagcagttaggc
cca
>M94081|TRAJ47*01|Homo sapiens|F|J-REGION|33096..33152|57 nt|3| | | | |57+0=57| |rev-compl|
tggaatatggaaacaaactggtctttggcgcaggaaccattctgagagtcaagtcct
>AF033825|TRAJ47*02|Homo sapiens|(F)|J-REGION|312..368|57 nt|3| |1| | |57+0=57| |rev-compl|
tggaatatggaaacaagctggtctttggcgcaggaaccattctgagagtcaagtcct
>M94081|TRAJ48*01|Homo sapiens|F|J-REGION|30737..30799|63 nt|3| | | | |63+0=63| |rev-compl|
tatctaactttggaaatgagaaattaacctttgggactggaacaagactcaccatcatac
cca
>M94081|TRAJ49*01|Homo sapiens|F|J-REGION|29734..29789|56 nt|2| | | | |56+0=56| |rev-compl|
gaacaccggtaaccagttctattttgggacagggacaagtttgacggtcattccaa
>M94081|TRAJ5*01|Homo sapiens|F|J-REGION|80444..80503|60 nt|3| | | | |60+0=60| |rev-compl|
tggacacgggcaggagagcacttacttttgggagtggaacaagactccaagtgcaaccaa
>M94081|TRAJ50*01|Homo sapiens|F|J-REGION|28839..28898|60 nt|3| | | | |60+0=60| |rev-compl|
tgaaaacctcctacgacaaggtgatatttgggccagggacaagcttatcagtcattccaa
>M94081|TRAJ51*01|Homo sapiens|P|J-REGION|27429..27491|63 nt|3| | | | |63+0=63| |rev-compl|
agatgcgtgacagctatgagaagctgatatttggaaaggagacatgactaactgtgaagc
caa
>M94081|TRAJ52*01|Homo sapiens|F|J-REGION|26474..26542|69 nt|3| | | | |69+0=69| |rev-compl|
ctaatgctggtggtactagctatggaaagctgacatttggacaagggaccatcttgactg
tccatccaa
>M94081|TRAJ53*01|Homo sapiens|F|J-REGION|23251..23316|66 nt|3| | | | |66+0=66| |rev-compl|
agaatagtggaggtagcaactataaactgacatttggaaaaggaactctcttaaccgtga
atccaa
>M94081|TRAJ54*01|Homo sapiens|F|J-REGION|22534..22593|60 nt|3| | | | |60+0=60| |rev-compl|
taattcagggagcccagaagctggtatttggccaaggaaccaggctgactatcaacccaa
>M94081|TRAJ55*01|Homo sapiens|P|J-REGION|21944..22000|57 nt|3| | | | |57+0=57| |rev-compl|
acaagtgctggtaatgctcctgttggggaaaggggatgagtacaaaaataaatccaa
>M94081|TRAJ56*01|Homo sapiens|F|J-REGION|19768..19829|62 nt|2| | | | |62+0=62| |rev-compl|
ttatactggagccaatagtaagctgacatttggaaaaggaataactctgagtgttagacc
ag
>M94081|TRAJ57*01|Homo sapiens|F|J-REGION|19119..19181|63 nt|3| | | | |63+0=63| |rev-compl|
taactcagggcggatctgaaaagctggtctttggaaagggaacgaaactgacagtaaacc
cat
>M94081|TRAJ58*01|Homo sapiens|ORF|J-REGION|17954..18016|63 nt|3| | | | |63+0=63| |rev-compl|
tttaagaaaccagtggctctaggttgacctttggggaaggaacacagctcacagtgaatc
ctg
>M94081|TRAJ59*01|Homo sapiens|ORF|J-REGION|16801..16854|54 nt|3| | | | |54+0=54| |rev-compl|
ggaaggaaggaaacaggaaatttacatttggaatggggacgcaagtgagagtga
>M16747|TRAJ6*01|Homo sapiens|F|J-REGION|31..92|62 nt|2| | | | |62+0=62| |rev-compl|
tgcatcaggaggaagctacatacctacatttggaagaggaaccagccttattgttcatcc
gt
>M94081|TRAJ60*01|Homo sapiens|P|J-REGION|16554..16610|57 nt|3| | | | |57+0=57| |rev-compl|
tgaagatcacctagatgctcaactttgggaaggggactgagttaattgtgagcctgg
>M94081|TRAJ61*01|Homo sapiens|ORF|J-REGION|15564..15623|60 nt|3| | | | |60+0=60| |rev-compl|
ggtaccgggttaataggaaactgacatttggagccaacactagaggaatcatgaaactca
>M94081|TRAJ7*01|Homo sapiens|F|J-REGION|77821..77879|59 nt|2| | | | |59+0=59| |rev-compl|
tgactatgggaacaacagactcgcttttgggaaggggaaccaagtggtggtcataccaa
>M94081|TRAJ8*01|Homo sapiens|F|J-REGION|76346..76405|60 nt|3| | | | |60+0=60| |rev-compl|
tgaacacaggctttcagaaacttgtatttggaactggcacccgacttctggtcagtccaa
>M94081|TRAJ9*01|Homo sapiens|F|J-REGION|75756..75816|61 nt|1| | | | |61+0=61| |rev-compl|
ggaaatactggaggcttcaaaactatctttggagcaggaacaagactatttgttaaagca
a