Mercurial > repos > davidvanzessen > vidjil_with_browser

comparison germline/TRAJ.fa @ 0:fe4001bdf8d4 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author davidvanzessen
date Tue, 09 Dec 2014 03:55:01 -0500
parents
children
comparison
equal deleted inserted replaced
-1:000000000000 0:fe4001bdf8d4
1 >X02884|TRAJ1*01|Homo sapiens|ORF|J-REGION|2363..2424|62 nt|2| | | | |62+0=62| |rev-compl|
2 gtatgaaagtattacctcccagttgcaatttggcaaaggaaccagagtttccacttctcc
3 cc
4 >M94081|TRAJ10*01|Homo sapiens|F|J-REGION|73699..73762|64 nt|1| | | | |64+0=64| |rev-compl|
5 atactcacgggaggaggaaacaaactcacctttgggacaggcactcagctaaaagtggaa
6 ctca
7 >M94081|TRAJ11*01|Homo sapiens|F|J-REGION|72706..72765|60 nt|3| | | | |60+0=60| |rev-compl|
8 tgaattcaggatacagcaccctcacctttgggaaggggactatgcttctagtctctccag
9 >X02885|TRAJ12*01|Homo sapiens|F|J-REGION|53..112|60 nt|3| | | | |60+0=60| |rev-compl|
10 ggatggatagcagctataaattgatcttcgggagtgggaccagactgctggtcaggcctg
11 >M94081|TRAJ13*01|Homo sapiens|F|J-REGION|71280..71342|63 nt|3| | | | |63+0=63| |rev-compl|
12 tgaattctgggggttaccagaaagttacctttggaattggaacaaagctccaagtcatcc
13 caa
14 >AC023226|TRAJ13*02|Homo sapiens|F|J-REGION|51292..51354|63 nt|3| | | | |63+0=63| | |
15 tgaattctgggggttaccagaaagttacctttggaactggaacaaagctccaagtcatcc
16 caa
17 >M94081|TRAJ14*01|Homo sapiens|F|J-REGION|70532..70583|52 nt|1| | | | |52+0=52| |rev-compl|
18 atttatagcacattcatctttgggagtgggacaagattatcagtaaaacctg
19 >X05775|TRAJ15*01|Homo sapiens|F|J-REGION|80..139|60 nt|3| | | | |60+0=60| |rev-compl|
20 ccaaccaggcaggaactgctctgatctttgggaagggaaccaccttatcagtgagttcca
21 >M94081|TRAJ15*02|Homo sapiens|F|J-REGION|69836..69895|60 nt|3| | | | |60+0=60| |rev-compl|
22 ccaaccaggcaggaactgctctgatctttgggaagggaacccacctatcagtgagttcca
23 >M94081|TRAJ16*01|Homo sapiens|F|J-REGION|68743..68802|60 nt|3| | | | |60+0=60| |rev-compl|
24 ggttttcagatggccagaagctgctctttgcaaggggaaccatgttaaaggtggatctta
25 >X05773|TRAJ17*01|Homo sapiens|F|J-REGION|173..235|63 nt|3| | | | |63+0=63| |rev-compl|
26 tgatcaaagctgcaggcaacaagctaacttttggaggaggaaccagggtgctagttaaac
27 caa
28 >M94081|TRAJ18*01|Homo sapiens|F|J-REGION|65876..65941|66 nt|3| | | | |66+0=66| |rev-compl|
29 ccgacagaggctcaaccctggggaggctatactttggaagaggaactcagttgactgtct
30 ggcctg
31 >M94081|TRAJ19*01|Homo sapiens|ORF|J-REGION|65489..65548|60 nt|3| | | | |60+0=60| |rev-compl|
32 gctatcaaagattttacaatttcacctttggaaagggatccaaacataatgtcactccaa
33 >X02884|TRAJ2*01|Homo sapiens|ORF|J-REGION|1397..1462|66 nt|3| | | | |66+0=66| |rev-compl|
34 tgaatactggaggaacaattgataaactcacatttgggaaagggacccatgtattcatta
35 tatctg
36 >M94081|TRAJ20*01|Homo sapiens|F|J-REGION|64552..64608|57 nt|3| | | | |57+0=57| |rev-compl|
37 gttctaacgactacaagctcagctttggagccggaaccacagtaactgtaagagcaa
38 >M94081|TRAJ21*01|Homo sapiens|F|J-REGION|63829..63883|55 nt|1| | | | |55+0=55| |rev-compl|
39 tacaacttcaacaaattttactttggatctgggaccaaactcaatgtaaaaccaa
40 >X02886|TRAJ22*01|Homo sapiens|F|J-REGION|405..467|63 nt|3| | | | |63+0=63| |rev-compl|
41 tttcttctggttctgcaaggcaactgacctttggatctgggacacaattgactgttttac
42 ctg
43 >M94081|TRAJ23*01|Homo sapiens|F|J-REGION|60650..60712|63 nt|3| | | | |63+0=63| |rev-compl|
44 tgatttataaccagggaggaaagcttatcttcggacagggaacggagttatctgtgaaac
45 cca
46 >X58763|TRAJ23*02|Homo sapiens|(F)|J-REGION|61..123|63 nt|3| | | | |63+0=63| |rev-compl|
47 tgatttataaccagggaggaaagcttatcttcggacagggaacggagctatctgtgaaac
48 cca
49 >X02887|TRAJ24*01|Homo sapiens|F|J-REGION|124..186|63 nt|3| | | | |63+0=63| |rev-compl|
50 tgacaactgacagctgggggaaattcgagtttggagcagggacccaggttgtggtcaccc
51 cag
52 >M94081|TRAJ24*02|Homo sapiens|F|J-REGION|60203..60265|63 nt|3| | | | |63+0=63| |rev-compl|
53 tgacaactgacagctgggggaaattgcagtttggagcagggacccaggttgtggtcaccc
54 cag
55 >X02888|TRAJ25*01|Homo sapiens|ORF|J-REGION|35..94|60 nt|3| | | | |60+0=60| |rev-compl|
56 cagaaggacaaggcttctcctttatctttgggaaggggacaaggctgcttgtcaagccaa
57 >M94081|TRAJ26*01|Homo sapiens|F|J-REGION|58680..58739|60 nt|3| | | | |60+0=60| |rev-compl|
58 gggataactatggtcagaattttgtctttggtcccggaaccagattgtccgtgctgccct
59 >M94081|TRAJ27*01|Homo sapiens|F|J-REGION|56507..56565|59 nt|2| | | | |59+0=59| |rev-compl|
60 taacaccaatgcaggcaaatcaacctttggggatgggactacgctcactgtgaagccaa
61 >M94081|TRAJ28*01|Homo sapiens|F|J-REGION|55857..55922|66 nt|3| | | | |66+0=66| |rev-compl|
62 catactctggggctgggagttaccaactcactttcgggaaggggaccaaactctcggtca
63 taccaa
64 >M94081|TRAJ29*01|Homo sapiens|F|J-REGION|54177..54236|60 nt|3| | | | |60+0=60| |rev-compl|
65 ggaattcaggaaacacacctcttgtctttggaaagggcacaagactttctgtgattgcaa
66 >X02884|TRAJ3*01|Homo sapiens|F|J-REGION|504..565|62 nt|2| | | | |62+0=62| |rev-compl|
67 ggggtacagcagtgcttccaagataatctttggatcagggaccagactcagcatccggcc
68 aa
69 >M94081|TRAJ30*01|Homo sapiens|F|J-REGION|53090..53146|57 nt|3| | | | |57+0=57| |rev-compl|
70 tgaacagagatgacaagatcatctttggaaaagggacacgacttcatattctcccca
71 >M14905|TRAJ31*01|Homo sapiens|F|J-REGION|77..132|56 nt|2| | | | |56+0=56| |rev-compl|
72 gaataacaatgccagactcatgtttggagatggaactcagctggtggtgaagccca
73 >M94081|TRAJ32*01|Homo sapiens|F|J-REGION|49581..49646|66 nt|3| | | | |66+0=66| |rev-compl|
74 tgaattatggcggtgctacaaacaagctcatctttggaactggcactctgcttgctgtcc
75 agccaa
76 >AF532854|TRAJ32*02|Homo sapiens|(F)|J-REGION|240..299|60 nt|3| |1| | |60+0=60|partial in 5'|rev-compl|
77 atggtggtgctacaaacaagctcatctttggaactggcactctgcttgctgtccagccaa
78 >M94081|TRAJ33*01|Homo sapiens|F|J-REGION|48843..48899|57 nt|3| | | | |57+0=57| |rev-compl|
79 tggatagcaactatcagttaatctggggcgctgggaccaagctaattataaagccag
80 >M35622|TRAJ34*01|Homo sapiens|F|J-REGION|30..87|58 nt|1| | | | |58+0=58| |rev-compl|
81 tcttataacaccgacaagctcatctttgggactgggaccagattacaagtctttccaa
82 >M94081|TRAJ35*01|Homo sapiens|ORF|J-REGION|46885..46943|59 nt|2| | | | |59+0=59| |rev-compl|
83 gataggctttgggaatgtgctgcattgcgggtccggcactcaagtgattgttttaccac
84 >M94081|TRAJ36*01|Homo sapiens|F|J-REGION|45353..45411|59 nt|2| | | | |59+0=59| |rev-compl|
85 tcaaactggggcaaacaacctcttctttgggactggaacgagactcaccgttattccct
86 >M94081|TRAJ37*01|Homo sapiens|F|J-REGION|43993..44054|62 nt|2| | | | |62+0=62| |rev-compl|
87 tggctctggcaacacaggcaaactaatctttgggcaagggacaactttacaagtaaaacc
88 ag
89 >AJ007774|TRAJ37*02|Homo sapiens|(F)|J-REGION|336..397|62 nt|2| |1| | |62+0=62| |rev-compl|
90 tggctctagcaacacaggcaaactaatctttgggcaagggacaactttacaagtaaaacc
91 ag
92 >M94081|TRAJ38*01|Homo sapiens|F|J-REGION|42473..42534|62 nt|2| | | | |62+0=62| |rev-compl|
93 taatgctggcaacaaccgtaagctgatttggggattgggaacaagcctggcagtaaatcc
94 ga
95 >M94081|TRAJ39*01|Homo sapiens|F|J-REGION|41843..41905|63 nt|3| | | | |63+0=63| |rev-compl|
96 tgaataataatgcaggcaacatgctcacctttggagggggaacaaggttaatggtcaaac
97 ccc
98 >M94081|TRAJ4*01|Homo sapiens|F|J-REGION|82396..82458|63 nt|3| | | | |63+0=63| |rev-compl|
99 tgttttctggtggctacaataagctgatttttggagcagggaccaggctggctgtacacc
100 cat
101 >M35620|TRAJ40*01|Homo sapiens|F|J-REGION|35..95|61 nt|1| | | | |61+0=61| |rev-compl|
102 actacctcaggaacctacaaatacatctttggaacaggcaccaggctgaaggttttagca
103 a
104 >M94081|TRAJ41*01|Homo sapiens|F|J-REGION|37900..37961|62 nt|2| | | | |62+0=62| |rev-compl|
105 gaactcaaattccgggtatgcactcaacttcggcaaaggcacctcgctgttggtcacacc
106 cc
107 >M94081|TRAJ42*01|Homo sapiens|F|J-REGION|37130..37195|66 nt|3| | | | |66+0=66| |rev-compl|
108 tgaattatggaggaagccaaggaaatctcatctttggaaaaggcactaaactctctgtta
109 aaccaa
110 >M94081|TRAJ43*01|Homo sapiens|F|J-REGION|36154..36207|54 nt|3| | | | |54+0=54| |rev-compl|
111 acaataacaatgacatgcgctttggagcagggaccagactgacagtaaaaccaa
112 >M35619|TRAJ44*01|Homo sapiens|F|J-REGION|30..92|63 nt|3| | | | |63+0=63| |rev-compl|
113 taaataccggcactgccagtaaactcacctttgggactggaacaagacttcaggtcacgc
114 tcg
115 >M94081|TRAJ45*01|Homo sapiens|F|J-REGION|34169..34234|66 nt|3| | | | |66+0=66| |rev-compl|
116 tgtattcaggaggaggtgctgacggactcacctttggcaaagggactcatctaatcatcc
117 agccct
118 >M94081|TRAJ46*01|Homo sapiens|F|J-REGION|33647..33709|63 nt|3| | | | |63+0=63| |rev-compl|
119 agaagaaaagcagcggagacaagctgacttttgggaccgggactcgtttagcagttaggc
120 cca
121 >M94081|TRAJ47*01|Homo sapiens|F|J-REGION|33096..33152|57 nt|3| | | | |57+0=57| |rev-compl|
122 tggaatatggaaacaaactggtctttggcgcaggaaccattctgagagtcaagtcct
123 >AF033825|TRAJ47*02|Homo sapiens|(F)|J-REGION|312..368|57 nt|3| |1| | |57+0=57| |rev-compl|
124 tggaatatggaaacaagctggtctttggcgcaggaaccattctgagagtcaagtcct
125 >M94081|TRAJ48*01|Homo sapiens|F|J-REGION|30737..30799|63 nt|3| | | | |63+0=63| |rev-compl|
126 tatctaactttggaaatgagaaattaacctttgggactggaacaagactcaccatcatac
127 cca
128 >M94081|TRAJ49*01|Homo sapiens|F|J-REGION|29734..29789|56 nt|2| | | | |56+0=56| |rev-compl|
129 gaacaccggtaaccagttctattttgggacagggacaagtttgacggtcattccaa
130 >M94081|TRAJ5*01|Homo sapiens|F|J-REGION|80444..80503|60 nt|3| | | | |60+0=60| |rev-compl|
131 tggacacgggcaggagagcacttacttttgggagtggaacaagactccaagtgcaaccaa
132 >M94081|TRAJ50*01|Homo sapiens|F|J-REGION|28839..28898|60 nt|3| | | | |60+0=60| |rev-compl|
133 tgaaaacctcctacgacaaggtgatatttgggccagggacaagcttatcagtcattccaa
134 >M94081|TRAJ51*01|Homo sapiens|P|J-REGION|27429..27491|63 nt|3| | | | |63+0=63| |rev-compl|
135 agatgcgtgacagctatgagaagctgatatttggaaaggagacatgactaactgtgaagc
136 caa
137 >M94081|TRAJ52*01|Homo sapiens|F|J-REGION|26474..26542|69 nt|3| | | | |69+0=69| |rev-compl|
138 ctaatgctggtggtactagctatggaaagctgacatttggacaagggaccatcttgactg
139 tccatccaa
140 >M94081|TRAJ53*01|Homo sapiens|F|J-REGION|23251..23316|66 nt|3| | | | |66+0=66| |rev-compl|
141 agaatagtggaggtagcaactataaactgacatttggaaaaggaactctcttaaccgtga
142 atccaa
143 >M94081|TRAJ54*01|Homo sapiens|F|J-REGION|22534..22593|60 nt|3| | | | |60+0=60| |rev-compl|
144 taattcagggagcccagaagctggtatttggccaaggaaccaggctgactatcaacccaa
145 >M94081|TRAJ55*01|Homo sapiens|P|J-REGION|21944..22000|57 nt|3| | | | |57+0=57| |rev-compl|
146 acaagtgctggtaatgctcctgttggggaaaggggatgagtacaaaaataaatccaa
147 >M94081|TRAJ56*01|Homo sapiens|F|J-REGION|19768..19829|62 nt|2| | | | |62+0=62| |rev-compl|
148 ttatactggagccaatagtaagctgacatttggaaaaggaataactctgagtgttagacc
149 ag
150 >M94081|TRAJ57*01|Homo sapiens|F|J-REGION|19119..19181|63 nt|3| | | | |63+0=63| |rev-compl|
151 taactcagggcggatctgaaaagctggtctttggaaagggaacgaaactgacagtaaacc
152 cat
153 >M94081|TRAJ58*01|Homo sapiens|ORF|J-REGION|17954..18016|63 nt|3| | | | |63+0=63| |rev-compl|
154 tttaagaaaccagtggctctaggttgacctttggggaaggaacacagctcacagtgaatc
155 ctg
156 >M94081|TRAJ59*01|Homo sapiens|ORF|J-REGION|16801..16854|54 nt|3| | | | |54+0=54| |rev-compl|
157 ggaaggaaggaaacaggaaatttacatttggaatggggacgcaagtgagagtga
158 >M16747|TRAJ6*01|Homo sapiens|F|J-REGION|31..92|62 nt|2| | | | |62+0=62| |rev-compl|
159 tgcatcaggaggaagctacatacctacatttggaagaggaaccagccttattgttcatcc
160 gt
161 >M94081|TRAJ60*01|Homo sapiens|P|J-REGION|16554..16610|57 nt|3| | | | |57+0=57| |rev-compl|
162 tgaagatcacctagatgctcaactttgggaaggggactgagttaattgtgagcctgg
163 >M94081|TRAJ61*01|Homo sapiens|ORF|J-REGION|15564..15623|60 nt|3| | | | |60+0=60| |rev-compl|
164 ggtaccgggttaataggaaactgacatttggagccaacactagaggaatcatgaaactca
165 >M94081|TRAJ7*01|Homo sapiens|F|J-REGION|77821..77879|59 nt|2| | | | |59+0=59| |rev-compl|
166 tgactatgggaacaacagactcgcttttgggaaggggaaccaagtggtggtcataccaa
167 >M94081|TRAJ8*01|Homo sapiens|F|J-REGION|76346..76405|60 nt|3| | | | |60+0=60| |rev-compl|
168 tgaacacaggctttcagaaacttgtatttggaactggcacccgacttctggtcagtccaa
169 >M94081|TRAJ9*01|Homo sapiens|F|J-REGION|75756..75816|61 nt|1| | | | |61+0=61| |rev-compl|
170 ggaaatactggaggcttcaaaactatctttggagcaggaacaagactatttgttaaagca
171 a