Mercurial > repos > davidvanzessen > plotting_merged
changeset 19:28cfca2e415d draft
Uploaded
| author | davidvanzessen |
|---|---|
| date | Mon, 30 Sep 2013 03:20:44 -0400 |
| parents | 705b77be17cf |
| children | 7707f65ca17c |
| files | RScript.r tool_dependencies.xml |
| diffstat | 2 files changed, 6 insertions(+), 48 deletions(-) [+] |
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--- a/RScript.r Fri Sep 27 09:40:57 2013 -0400 +++ b/RScript.r Mon Sep 30 03:20:44 2013 -0400 @@ -91,12 +91,12 @@ #plotall #ggsave(outFile, dpi=125) -#sink(outFile, append=FALSE, split=FALSE) -#merged -#unlink(outFile) +sink(outFile, append=FALSE, split=FALSE) +merged +unlink(outFile) -png(outFile,width = 1920, height = 1200) -print(plotall = grid.arrange(pV, arrangeGrob(pD, pJ, ncol=2), ncol=1, widths=c(1,1.2))) -dev.off() +#png(outFile,width = 1920, height = 1200) +#print(plotall = grid.arrange(pV, arrangeGrob(pD, pJ, ncol=2), ncol=1, widths=c(1,1.2))) +#dev.off()
--- a/tool_dependencies.xml Fri Sep 27 09:40:57 2013 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,42 +0,0 @@ -<?xml version="1.0"?> -<tool_dependency> - <package name="R" version="2.15.1"> - <install version="1.0"> - <actions> - <action type="download_by_url">http://CRAN.R-project.org/src/base/R-2/R-2.15.1.tar.gz</action> - <action type="shell_command">./configure --prefix=$INSTALL_DIR --with-x=no</action> - <action type="shell_command">make</action> - - <action type="download_file">http://cran.r-project.org/src/contrib/gridExtra_0.9.1.tar.gz</action> - <action type="move_file"> - <source>gridExtra_0.9.1.tar.gz</source> - <destination>$INSTALL_DIR</destination> - </action> - <action type="shell_command">$INSTALL_DIR/bin/R CMD INSTALL $INSTALL_DIR/gridExtra_0.9.1.tar.gz</action> - - <action type="download_file">http://cran.r-project.org/src/contrib/ggplot2_0.9.3.1.tar.gz</action> - <action type="move_file"> - <source>ggplot2_0.9.3.1.tar.gz</source> - <destination>$INSTALL_DIR</destination> - </action> - <action type="shell_command">$INSTALL_DIR/bin/R CMD INSTALL $INSTALL_DIR/ggplot2_0.9.3.1.tar.gz</action> - - <action type="download_file">http://cran.r-project.org/src/contrib/plyr_1.8.tar.gz</action> - <action type="move_file"> - <source>plyr_1.8.tar.gz</source> - <destination>$INSTALL_DIR</destination> - </action> - <action type="shell_command">$INSTALL_DIR/bin/R CMD INSTALL $INSTALL_DIR/plyr_1.8.tar.gz</action> - - - <action type="set_environment"> - <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> - </action> - <action type="set_environment"> - <environment_variable name="R_SCRIPT_PATH" action="set_to">$REPOSITORY_INSTALL_DIR</environment_variable> - </action> - </actions> - </install> - <readme>You need a FORTRAN compiler or perhaps f2c in addition to a C compiler to build R.</readme> - </package> -</tool_dependency>