Mercurial > repos > davidvanzessen > imgt_loader_igg
annotate imgt_loader.xml @ 7:04e72fc8b2c4 draft default tip
Uploaded
| author | davidvanzessen |
|---|---|
| date | Fri, 05 Sep 2014 04:21:48 -0400 |
| parents | |
| children |
| rev | line source |
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| 7 | 1 <tool id="imgt_loader_igg" name="IMGT Loader" version="1.0"> |
| 2 <description> </description> | |
| 3 <command interpreter="bash"> | |
| 4 imgt_loader.sh $in_file $out_file "tmp" | |
| 5 </command> | |
| 6 <inputs> | |
| 7 <param name="in_file" type="data" label="Archive with files" /> | |
| 8 </inputs> | |
| 9 <outputs> | |
| 10 <data format="tabular" name="out_file" label="IMGT Loader on ${in_file.name}"/> | |
| 11 </outputs> | |
| 12 <help> | |
| 13 Converting all 1_Summary, 5_AA-sequence and 6_Junction files belonging to a sample from an archive (supported: 7z, rar, tar, tar.bz2, tar.gz and zip) into a single file to be used in the Immune repertoire toolchain (Step 3) | |
| 14 </help> | |
| 15 | |
| 16 </tool> |