annotate imgt_concatenate.xml @ 2:22f89d6c6f8e draft default tip

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author davidvanzessen
date Wed, 20 Jul 2016 08:08:07 -0400
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1 <tool id="imgt_concatenate" name="IMGT Concatenate" version="1.0">
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2 <description> </description>
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3 <command interpreter="bash">
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4 imgt_concatenate.sh $out_file
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5 #for $i, $f in enumerate($files)
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6 "$f.file"
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7 #end for
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8 </command>
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9 <inputs>
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10 <repeat name="files" title="Sample" min="2" default="2">
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11 <param name="file" format="peptideshaker_archive" type="data" label="IMGT zip file" />
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12 </repeat>
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13 <param name="label" type="text" label="A name for the new dataset" size="25">
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14 <validator type="regex" message="Fill in a name for the new dataset">.+</validator>
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15 </param>
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16 </inputs>
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17 <outputs>
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18 <data format="peptideshaker_archive" name="out_file" label="${label}"/>
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19 </outputs>
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20 <help>
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21 Concatenate two or more IMGT files to create one new IMGT zip with all the sequences of the inputs.
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22
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23 </help>
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24
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25 </tool>