Mercurial > repos > davidvanzessen > igblast_human
view tool_dependencies.xml @ 4:eed76d900bc0 draft
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author | davidvanzessen |
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date | Tue, 24 Sep 2013 04:15:51 -0400 |
parents | 65f8bb1b0701 |
children | 906900f8e32c |
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<?xml version="1.0"?> <tool_dependency> <set_environment version="1.0"> </set_environment> <package name="igBlastn" version="1.0.0"> <install version="1.0"> <actions> <action type="download_by_url">ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/1.0.0/ncbi-igblast-1.0.0-x64-linux.tar.gz</action> <action type="move_file"> <source>ncbi-igblast-1.0.0-x64-linux.tar.gz</source> <destination>$INSTALL_DIR</destination> </action> <action type="make_directory"> $INSTALL_DIR/igblast </action> <action type="shell_command">tar -zxvf $INSTALL_DIR/ncbi-igblast-1.0.0-x64-linux.tar.gz -C $INSTALL_DIR/igblast</action> <action type="set_environment"> <environment_variable name="IGDATA" action="set_to">$INSTALL_DIR/igblast</environment_variable> </action> </actions> </install> <readme> Installs R with apt-get. </readme> </package> </tool_dependency>