Mercurial > repos > davidvanzessen > igblast_human

comparison tool_dependencies.xml @ 3:65f8bb1b0701 draft

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author davidvanzessen
date Tue, 24 Sep 2013 04:07:18 -0400
parents 40954f0f8d14
children eed76d900bc0
comparison
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2:40954f0f8d14 3:65f8bb1b0701
9 <action type="download_by_url">ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/1.0.0/ncbi-igblast-1.0.0-x64-linux.tar.gz</action> 9 <action type="download_by_url">ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/1.0.0/ncbi-igblast-1.0.0-x64-linux.tar.gz</action>
10 <action type="move_file"> 10 <action type="move_file">
11 <source>ncbi-igblast-1.0.0-x64-linux.tar.gz</source> 11 <source>ncbi-igblast-1.0.0-x64-linux.tar.gz</source>
12 <destination>$INSTALL_DIR</destination> 12 <destination>$INSTALL_DIR</destination>
13 </action> 13 </action>
14 <action type="shell_command">tar -zxvf ncbi-igblast-1.0.0-x64-linux.tar.gz</action> 14 <action type="shell_command">tar -zxvf $INSTALL_DIR/ncbi-igblast-1.0.0-x64-linux.tar.gz</action>
15 15
16 <action type="set_environment"> 16 <action type="set_environment">
17 <environment_variable name="IGDATA" action="set_to">$INSTALL_DIR/ncbi-igblast-1.0.0-x64-linux</environment_variable> 17 <environment_variable name="IGDATA" action="set_to">$INSTALL_DIR/ncbi-igblast-1.0.0-x64-linux</environment_variable>
18 </action> 18 </action>
19 </actions> 19 </actions>