Mercurial > repos > davidvanzessen > baseline_bayesian_estimation

diff baseline.xml @ 3:38c038c17d0c draft

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Uploaded
author davidvanzessen
date Wed, 13 Aug 2014 09:07:54 -0400
parents 94fada165724
children 1726dc8f3e0a
line wrap: on
line diff
--- a/baseline.xml	Wed Aug 13 07:32:38 2014 -0400
+++ b/baseline.xml	Wed Aug 13 09:07:54 2014 -0400
@@ -11,7 +11,7 @@
  ${input.id}
 		#end for 
 		"
-    $reference $out_file
+    $reference $out_file "$selection"
 	</command>
 	<inputs>
 		<repeat name="inputs" title="inputs" min="1" default="1">
@@ -50,6 +50,12 @@
 			<option value="1:26:38:55:65:104:-">IMGT® No CDR3</option>
 			<option value="1:26:38:55:65:104:116">IMGT®</option>
 		</param>
+		<param name="selection" type="select" label="Unique Selection Definition">
+			<option value="VGene,AA.JUNCTION">VGene, AA CDR3</option>
+			<option value="VGene,JGene,AA.JUNCTION">VGene, JGene, AA CDR3</option>
+			<option value="VGene,DGene,JGene,CDR3.Seq">VGene, DGene, JGene, AA CDR3</option>
+			<option value="Sequence.ID">None</option>
+		</param>
 	</inputs>
 	<outputs>
 		<data format="pdf" name="out_file" label = "Baseline on ${on_string}"/>