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1 from galaxy.datatypes.data import Text
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2
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3 class FlapjackMapFormat(Text):
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4 file_ext = "fjmap"
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5
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6 def sniff( self, filename ):
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7 h = open(filename)
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8 line = h.readline()
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9 if line.rstrip() != "# fjFile = MAP":
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10 h.close()
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11 return False
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12 return True
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13
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14 class FlapjackGenotypeFormat(Text):
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15 file_ext = "fjgenotype"
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16
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17 def sniff( self, filename ):
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18 h = open(filename)
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19 line = h.readline()
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20 if line.rstrip() != "# fjFile = GENOTYPE":
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21 h.close()
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22 return False
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23 return True
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24
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25 class FlapjackPhenotypeFormat(Text):
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26 file_ext = "fjphenotye"
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27
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28 def sniff( self, filename ):
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29 h = open(filename)
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30 line = h.readline()
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31 if line.rstrip() != "# fjFile = PHENOTYPE":
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32 h.close()
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33 return False
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34 return True
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35
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36 class FlapjackQtlFormat(Text):
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37 file_ext = "fjqtl"
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38
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39 def sniff( self, filename ):
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40 h = open(filename)
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41 line = h.readline()
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42 if line.rstrip() != "# fjFile = QTL":
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43 h.close()
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44 return False
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45 return True
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46
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47 class FlapjackGraphFormat(Text):
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48 file_ext = "fjgraph"
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49
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50 def sniff( self, filename ):
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51 h = open(filename)
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52 line = h.readline()
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53 if line.rstrip() != "# fjFile = GRAPH":
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54 h.close()
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55 return False
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56 return True |
