Mercurial > repos > climate > c3s

annotate c3s.sh @ 0:7fa6bc1fb588 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
author climate
date Tue, 13 Apr 2021 18:32:15 +0000
parents
children eadc0e7f9abd
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
7fa6bc1fb588 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff changeset
1 #!/usr/bin/env bash
7fa6bc1fb588 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff changeset
2
7fa6bc1fb588 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff changeset
3 if [ -f download.tar.gz ]; then
7fa6bc1fb588 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff changeset
4 tar zxvf download.tar.gz
7fa6bc1fb588 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff changeset
5 cat *.grib > tmp.grib
7fa6bc1fb588 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff changeset
6 cdo setgridtype,regular tmp.grib tmpg.grib
7fa6bc1fb588 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff changeset
7 cdo -f nc -t ecmwf copy tmpg.grib tmp.nc
7fa6bc1fb588 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff changeset
8 elif [ -f download.zip ]; then
7fa6bc1fb588 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff changeset
9 unzip download.zip
7fa6bc1fb588 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff changeset
10 cat *.grib > tmp.grib
7fa6bc1fb588 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff changeset
11 cdo setgridtype,regular tmp.grib tmpg.grib
7fa6bc1fb588 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff changeset
12 cdo -f nc -t ecmwf copy tmpg.grib tmp.nc
7fa6bc1fb588 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff changeset
13 elif [ -f download.grib ]; then
7fa6bc1fb588 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff changeset
14 cdo -f nc -t ecmwf copy download.grib tmp.nc
7fa6bc1fb588 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff changeset
15 elif [ -f download.nc ]; then
7fa6bc1fb588 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff changeset
16 mv download.nc tmp.nc
7fa6bc1fb588 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff changeset
17 else
7fa6bc1fb588 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff changeset
18 echo "No data found! Check your request and/or credentials."
7fa6bc1fb588 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff changeset
19 fi