Mercurial > repos > chemteam > mdanalysis_dihedral
changeset 6:43b6db6e6955 draft default tip
"planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 7a25958195ccc8f448dd64ddcc36e8f5e5979d8b"
| author | chemteam |
|---|---|
| date | Wed, 20 May 2020 16:56:33 +0000 |
| parents | 86e32cac6f9a |
| children | |
| files | angle.py dihedrals.py distance_single.py ramachandran_plots.py rdf.py |
| diffstat | 5 files changed, 10 insertions(+), 5 deletions(-) [+] |
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--- a/angle.py Fri Feb 07 00:39:15 2020 +0000 +++ b/angle.py Wed May 20 16:56:33 2020 +0000 @@ -7,12 +7,13 @@ import MDAnalysis as mda import matplotlib -matplotlib.use('Agg') # noqa import matplotlib.pyplot as plt import numpy as np from numpy.linalg import norm +matplotlib.use('Agg') # noqa + def parse_command_line(argv): parser = argparse.ArgumentParser()
--- a/dihedrals.py Fri Feb 07 00:39:15 2020 +0000 +++ b/dihedrals.py Wed May 20 16:56:33 2020 +0000 @@ -8,11 +8,12 @@ from MDAnalysis.lib.distances import calc_dihedrals import matplotlib -matplotlib.use('Agg') # noqa import matplotlib.pyplot as plt import numpy as np +matplotlib.use('Agg') # noqa + def parse_command_line(argv): parser = argparse.ArgumentParser()
--- a/distance_single.py Fri Feb 07 00:39:15 2020 +0000 +++ b/distance_single.py Wed May 20 16:56:33 2020 +0000 @@ -6,11 +6,12 @@ import MDAnalysis as mda import matplotlib -matplotlib.use('Agg') # noqa import matplotlib.pyplot as plt import numpy as np +matplotlib.use('Agg') # noqa + def parse_command_line(argv): parser = argparse.ArgumentParser()
--- a/ramachandran_plots.py Fri Feb 07 00:39:15 2020 +0000 +++ b/ramachandran_plots.py Wed May 20 16:56:33 2020 +0000 @@ -9,13 +9,14 @@ from MDAnalysis.lib.distances import calc_dihedrals import matplotlib -matplotlib.use('Agg') # noqa import matplotlib.pyplot as plt import numpy as np import seaborn as sns +matplotlib.use('Agg') # noqa + def parse_command_line(argv): parser = argparse.ArgumentParser()
--- a/rdf.py Fri Feb 07 00:39:15 2020 +0000 +++ b/rdf.py Wed May 20 16:56:33 2020 +0000 @@ -8,11 +8,12 @@ from MDAnalysis.analysis.rdf import InterRDF import matplotlib -matplotlib.use('Agg') # noqa import matplotlib.pyplot as plt import numpy as np +matplotlib.use('Agg') # noqa + def parse_command_line(argv): parser = argparse.ArgumentParser()