Mercurial > repos > blankenberg > package_pybamtools
annotate tool_dependencies.xml @ 6:0e053330e01c
Update checkout revision.
| author | Daniel Blankenberg <dan@bx.psu.edu> |
|---|---|
| date | Fri, 23 Aug 2013 17:30:04 -0400 |
| parents | 0b4fb804d717 |
| children | a0c802cd49e7 |
| rev | line source |
|---|---|
| 1 | 1 <?xml version="1.0"?> |
| 2 <tool_dependency> | |
| 3 <package name="pyBamTools" version="0.0.1"> | |
| 4 <install version="1.0"> | |
| 5 <actions> | |
|
6
0e053330e01c
Update checkout revision.
Daniel Blankenberg <dan@bx.psu.edu>
parents:
5
diff
changeset
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6 <action type="shell_command">hg clone -r bef45393f6519556f45037c1de75580e9121f3d1 https://bitbucket.org/dan/pybamtools pyBamTools</action> |
| 1 | 7 <action type="make_directory">$INSTALL_DIR/lib/python</action> |
| 8 <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python && python setup.py install --home $INSTALL_DIR</action> | |
| 9 <action type="set_environment"> | |
| 10 <environment_variable name="PYTHONPATH" action="append_to">$INSTALL_DIR/lib/python</environment_variable> | |
| 11 </action> | |
| 12 </actions> | |
| 13 </install> | |
| 14 <readme> | |
| 15 Installs pyBamTools libraries. | |
| 16 </readme> | |
| 17 </package> | |
| 18 </tool_dependency> |