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annotate tool_dependencies.xml @ 1:f513cc9b881c

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Add tool_dependencies.xml.
author Daniel Blankenberg <dan@bx.psu.edu>
date Tue, 14 May 2013 10:10:09 -0400
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children 7f55ab725342
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f513cc9b881c Add tool_dependencies.xml.
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="pyBamParser" version="0.0.1">
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4 <install version="1.0">
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5 <actions>
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6 <action type="shell_command">hg clone -r bca67ec9a3bc838aef5343f5bbea57b1bc63c9d6 https://bitbucket.org/dan/pybamparser</action>
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7 <action type="make_directory">$INSTALL_DIR/lib/python</action>
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8 <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; python setup.py install --home $INSTALL_DIR</action>
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9 <action type="set_environment">
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10 <environment_variable name="PYTHONPATH" action="append_to">$INSTALL_DIR/lib/python</environment_variable>
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11 </action>
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12 </actions>
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13 </install>
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14 <readme>
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15 Installs pyBamParser libraries.
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16 </readme>
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17 </package>
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18 </tool_dependency>