Mercurial > repos > blankenberg > data_manager_fetch_genome_all_fasta
view data_manager_conf.xml @ 7:079f737d675f default tip
Allow sorting FASTA by sequence identifier (chromosome).
author | Daniel Blankenberg <dan@bx.psu.edu> |
---|---|
date | Tue, 07 Jan 2014 14:49:01 -0500 |
parents | ca8b3709309e |
children |
line wrap: on
line source
<?xml version="1.0"?> <data_managers> <data_manager tool_file="data_manager/data_manager_fetch_genome_all_fasta.xml" id="fetch_genome_all_fasta"> <data_table name="all_fasta"> <output> <column name="value" /> <column name="dbkey" /> <column name="name" /> <column name="path" output_ref="out_file" > <move type="file"> <source>${path}</source> <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/seq/${path}</target> </move> <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/seq/${path}</value_translation> <value_translation type="function">abspath</value_translation> </column> </output> </data_table> </data_manager> </data_managers>