Mercurial > repos > bgruening > upload_testing

diff bamCoverage.xml @ 51:6a2a7374450b

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Uploaded
author bgruening
date Fri, 02 Aug 2013 13:53:20 -0400
parents c6f1a059bc7d
children 411c871f4cfd
line wrap: on
line diff
--- a/bamCoverage.xml	Fri Aug 02 12:54:19 2013 -0400
+++ b/bamCoverage.xml	Fri Aug 02 13:53:20 2013 -0400
@@ -1,10 +1,8 @@
 <tool id="bamCoverage" name="bamCoverage" version="1.0">
   <description>Given a BAM file, generates a coverage bigwig file.  Multiple options available to count reads and normalize coverage.</description>
   <requirements>
+    <requirement type="package" version="1.5.1_98e5d8a61431ea8605c0643d991a1a5d8999b4dc">deepTools</requirement>
     <requirement type="package" version="1.7.1">numpy</requirement>
-    <requirement type="python-module">argsparse</requirement>
-    <requirement type="python-module">pysam</requirement>
-    <requirement type="python-module">numpy</requirement>
   </requirements>
   <command>bamCoverage
   --bam '$bamInput'